Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00092 TCCATACTCATTAGTTTTCATACTTTATTTGTCACTACTAAGTTCCACTTCGACGCCCCCTCACCCACTTTCTTCATCTCTTCGTGGCTGCTGGAATCGGGTATGACTGCCATTAAATTTTACTTCAATCACACTCTCTTTTGATTCTCTCCCGGTTCACTGTTTTGAAGCAAAGCTTTCTGTGAGAATCGGATCTTCCTCTGCTCTGATTCTGAGATAAAGAGGGTTACGCAGGGTTCGAGTTTGTGAAGTTGAATTTTTTGAGCCTTTTGATGGACGAGAATTTGCTTGACGATATTATTCGGAGGCTTATATCAGCAAAGAATGGCAGAACGACGAAGCAGGTGCAGCTTACAGAATCCGAAATCCGACAGCTATGTGTCGTGTCGAAGGAGATTTTTCTCAGTCAGCCCAATCTTCTCGAACTGGAAGCTCCTATAAAGATTTGTGGAGATGTCCACGGTCAATTTTCAGATCTTTTAAGGTTGTTTGAGTATGGTGGATACCCGCCAGAGGCAAATTATTTGTTTCTTGGTGATTATGTTGATCGTGGCAAGCAAAGCATAGAGACTATATGTTTACTCCTTGCATACAAGATTAAGTACAAAGAGAACTTCTTTCTTCTCAGGGGAAACCATGAATGTGCTTCCATCAATCGAATATATGGTTTTTATGATGAGTGCAAGAGGAGGTTTAATGTTCGTACCTGGAAGACTTTTACTGAGTGCTTTAACTGCCTGCCTGTCGCTGCTCTTATTGATGAGAAGATCCTTTGCATGCACGGTGGGCTCTCTCCTGAGCTCAAAAGCTTGGATCAGATAAGGAATATTGCTCGCCCTGTTGATGTGCCAGATCAGGGCCTTCTCTGTGACCTGCTATGGGCTGATCCTGATAAAGATATTGATGGCTGGGGAGAAAATGACCGGGGTGTGTCCTATACCTTTGGAGCTGACAAGGTTGTAGAATTCCTTCAGAAACATGATCTTGATCTGGTTTGCAGAGCTCACCAGGTGGTGGAAGATGGGTATGAGTTTTTTGCAAAGCGGCAGCTGGTGACCATATTCTCTGCACCAAATTACTGTGGTGAGTTTGATAATGCTGGTGCTATGATGAGTGTGGATGACACCTTGACGTGCTCTTTCCAGATACTTAAATCTTCTGAGAAGAAAGGGAAAATTGGATTTGGTAACAGCATGTTGAGACCCGGAACTCCACCCCATAAGGGTGGGAATGGTTAA 1238 0.4354 MDENLLDDIIRRLISAKNGRTTKQVQLTESEIRQLCVVSKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRTWKTFTECFNCLPVAALIDEKILCMHGGLSPELKSLDQIRNIARPVDVPDQGLLCDLLWADPDKDIDGWGENDRGVSYTFGADKVVEFLQKHDLDLVCRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKGKIGFGNSMLRPGTPPHKGGNG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Bach10g00092 321 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Bach10g00092 321 SUPERFAMILY Metallo-dependent phosphatases 21 297 IPR029052 -
Bach10g00092 321 FunFam Serine/threonine-protein phosphatase 1 303 - -
Bach10g00092 321 Gene3D - 1 306 IPR029052 -
Bach10g00092 321 CDD MPP_PP1_PPKL 6 294 - -
Bach10g00092 321 SMART pp2a_7 27 297 IPR006186 GO:0016787
Bach10g00092 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Bach10g00092 321 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Bach10g00092 321 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Bach10g00092 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00092 Bach-Chr10 689400 693355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00092 56 243 Calmodulin-binding Proteins AT5G63870 30.493 9.11e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00092 K06269 - cit:102611078 642.499