Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00082 ATGGGCAACTGTAGCATCGGCGTTACCTCTGGCGAAACCCAAGTCAACTCTGACGATGGCGCCACCCACTCTGGCCGCCCTCTCCATCAAGCTTCCAATGGCGGCATCTCCGTTCTCCCTTCCAATTCCAAGCCCTCACCACCTAAACCACATCTTTCCTCCTCCATTGGCCGTGTCCTCGGCCGACCCATGGAAGATGTTCGTTGCACCTTCATCTTCGGCGGTGAACTGGGCCGTGGCCAATTTGGCGTTACCTACTTAGTCACCCACAAAGTTACTCAAGAACAATTTGCCTGCAAATCCATCGTCACCCATAAACTGATTGACCAAGACGATATTGATGACATCCGGCGCGAGGTCCAAATAATGCATCACCTCACTGGTCATCGAAACATCGTCGAGCTCAGGGGAGCTTACGAGGATCGCCACTCAGTCAATTTGATCATGGAGCTCTGTGCTGGTGGGGAGCTCTTCGATAGGATAATAGCCAAGGGCCATTACTCTGAGAGAGCTGCAGCTAACTTGTGTCGCCAGATTGTGACGGTGGCTCATAATTGTCACTCAATGGGAGTAATGCATAGGGATTTGAAACCTGAGAATTTCTTGTTCTTCAGTGAAGACGAGACTTCACCCCTAAAAGCTACGGACTTCGGTCTCTCGGTATTTTTCAAGCCAGCAGGACAGGTATTCAAAAATCTTGTTGGAAGTGCATATTATGTTGCTCCTGAGGTACTGCGCAGAAGTTATGGACCTGAAGCTGATATTTGGAGTGCCGGGGTTATATTATACATTCTGCTATGTGGAGTCCCGCCCTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCGATTCTTCGTGGACATATTGATTTCATATCAGATCCTTGGCCTTCCATATCAAGTAGTGCCAAAGATCTGATCAGGAAGATGCTACGAGCAGACCCTGAAGAAAGGCTTTCAGCAGTTGAAGTCCTTTATCATCCTTGGATGAGAGAAGATGGAGATGCATCTGATGAACCTCTTGATATTGCTGTTTTAACCAGAATGAAGCAATTCCGGGCAATGAACAAGTTAAAGAAAGTAGCTCTGAAGGTAATTGCAGAAAACCTTTCTGAAGAAGAAATTATTGGATGGAAAGAAATGTTCAAATCCATGGACACCGATAACAGTGGAACAATCACTTTTGAAGAGTTAAAATCTGGTCTCCCTAAACTGGGCACCAAGCTCTCTGAGTCCGAAGTAAGACAATTGCTGGAAGCGGCTGATGTTGATGGAAATGGCACCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAAGACCATCTATACAAAGCCTTTGAATATTTTGACAAGGATAAGAGCGGGTACATCACAATGGAAGAGTTGGAATCTACCCTCAAGAATTATAACATGGGTGATGAGAAGACAATAAAGGAGATCATCGCAGAAGTTGACACAGACAATGATGGAAGAATAAACTATGATGAGTTTGTAACCATGATGAGGAAAGGCAATCCAGAATTGGTAACAAATAGACGTCGCAAATAA 1572 0.4497 MGNCSIGVTSGETQVNSDDGATHSGRPLHQASNGGISVLPSNSKPSPPKPHLSSSIGRVLGRPMEDVRCTFIFGGELGRGQFGVTYLVTHKVTQEQFACKSIVTHKLIDQDDIDDIRREVQIMHHLTGHRNIVELRGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVAHNCHSMGVMHRDLKPENFLFFSEDETSPLKATDFGLSVFFKPAGQVFKNLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLCGVPPFWAENEQGIFDAILRGHIDFISDPWPSISSSAKDLIRKMLRADPEERLSAVEVLYHPWMREDGDASDEPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGWKEMFKSMDTDNSGTITFEELKSGLPKLGTKLSESEVRQLLEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKSGYITMEELESTLKNYNMGDEKTIKEIIAEVDTDNDGRINYDEFVTMMRKGNPELVTNRRRK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00082 523 CDD STKc_CAMK 71 329 - -
Bach10g00082 523 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bach10g00082 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Bach10g00082 523 Gene3D Transferase(Phosphotransferase) domain 1 157 340 - -
Bach10g00082 523 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Bach10g00082 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 76 505 - -
Bach10g00082 523 Pfam EF-hand domain pair 448 510 IPR002048 GO:0005509
Bach10g00082 523 Pfam EF-hand domain pair 379 438 IPR002048 GO:0005509
Bach10g00082 523 Gene3D Phosphorylase Kinase; domain 1 73 156 - -
Bach10g00082 523 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Bach10g00082 523 ProSiteProfiles Protein kinase domain profile. 71 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00082 523 Gene3D - 341 513 - -
Bach10g00082 523 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Bach10g00082 523 SMART serkin_6 71 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00082 523 Pfam Protein kinase domain 74 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00082 523 FunFam calcium-dependent protein kinase 1 157 337 - -
Bach10g00082 523 CDD EFh 360 402 IPR002048 GO:0005509
Bach10g00082 523 FunFam Calcium-dependent protein kinase 1 73 156 - -
Bach10g00082 523 FunFam Calcium-dependent protein kinase 1 338 513 - -
Bach10g00082 523 ProSiteProfiles EF-hand calcium-binding domain profile. 445 479 IPR002048 GO:0005509
Bach10g00082 523 SMART efh_1 449 477 IPR002048 GO:0005509
Bach10g00082 523 SMART efh_1 377 405 IPR002048 GO:0005509
Bach10g00082 523 SMART efh_1 413 441 IPR002048 GO:0005509
Bach10g00082 523 SMART efh_1 484 512 IPR002048 GO:0005509
Bach10g00082 523 MobiDBLite consensus disorder prediction 1 57 - -
Bach10g00082 523 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Bach10g00082 523 MobiDBLite consensus disorder prediction 1 42 - -
Bach10g00082 523 ProSiteProfiles EF-hand calcium-binding domain profile. 480 515 IPR002048 GO:0005509
Bach10g00082 523 SUPERFAMILY EF-hand 369 510 IPR011992 -
Bach10g00082 523 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Bach10g00082 523 SUPERFAMILY Protein kinase-like (PK-like) 44 353 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00082 Bach-Chr10 617514 620317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00082 57 522 EF-hand Containing Proteins AT4G23650 78.541 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach10g00082 Pkinase 3.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00082 K13412 - qsa:O6P43_034294 888.256