Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00044 ATGGCTACCTTATCAATCTTGAACCTGTTATTACTCTTTCTCTGGTTACCCGACTCAACCAGAAGCACTCGTGTTTGTCAAATGGAGTCTTGCCAATGGGCCGGACCTCGTGTTCAATTCCCGTTCCGGTTGCGAGAATCCAATCAAAGCAATCGATGTGGCTACCAAGGTTTCGAGCTCTCGTGCAACGACAGAAGACAAACGTTGCTTCATATCTCAAAAGCCGGAGACTTCCTTGTCAAAGGAATCTCCCTTGAGGACCAAAAAGTATGGATCAATGATCCCGATCTTTGCCTCCCTAGCCGCTTCCTCAACAACTTCAACCTTACAGATTCGCCCTTCAGATTTAGTGACGAATATAATCTTGTAAATTTGACCTTCCTCAGCTGTCCCTCCAACATCACCGACACATACCCTCTGCCGCCCGTAACTTGTCTAAGCAATAACAGGGACGACAACTATTCGGTCATAGCTGTCTCGCCTGATTTTCCATTCCCAAATTCGTGGATTTCATCGTGCCAGTTCATTTCTTCAGCTTTGTTTCCCTCTATTGATACGCCACGTTGGCAATTCTGGAACAGAATTTACGCAGATGTCGAATTGCAATGGAGCACACCTGATTGTAAACATTGTCAAGGTGGACACTGTGGTTTCTCCAGCGATTCGGGTTTAGACGTTGCTTGTTACGAAGAAGGGCGGCAAGGTCTTTCGAGGAAGGCAAAATATGCCATAGCTCTATGCTTGGGTATACCTGGACTCATAGTCCTCATCGTGTTAGCAATGTTATTTAGAGGTAAAGTGATGAACAGGGGTAGTCGGCAACAACCACGACAACCAAGAATAGATCTAGCTGACTCAAATATGCCACAACCGGTTCCTGCAGCAATCGGGCTTGACGTGTCGATGATAGAAAAATATCCGATAACTCATCTTGGTGAGAGCGGAGGAATGCAATTACCCAATCCCAATGACAATGTTTGCTCTATATGCTTATGTGAGTACCAGCCCAGGGAAACGTTAAGGACCATACCTCAGTGTAATCACTATTTTCATGTCAGTTGCATAGATGGGTGGCTCAAGATGAATGCGACATGCCCTTTGTGCCGAAATTTGCCGGAGAGGTCCTCTTTGCCCACCGTCTCTTCTTTGTCTTCAACGAATTCTTAG 1167 0.4584 MATLSILNLLLLFLWLPDSTRSTRVCQMESCQWAGPRVQFPFRLRESNQSNRCGYQGFELSCNDRRQTLLHISKAGDFLVKGISLEDQKVWINDPDLCLPSRFLNNFNLTDSPFRFSDEYNLVNLTFLSCPSNITDTYPLPPVTCLSNNRDDNYSVIAVSPDFPFPNSWISSCQFISSALFPSIDTPRWQFWNRIYADVELQWSTPDCKHCQGGHCGFSSDSGLDVACYEEGRQGLSRKAKYAIALCLGIPGLIVLIVLAMLFRGKVMNRGSRQQPRQPRIDLADSNMPQPVPAAIGLDVSMIEKYPITHLGESGGMQLPNPNDNVCSICLCEYQPRETLRTIPQCNHYFHVSCIDGWLKMNATCPLCRNLPERSSLPTVSSLSSTNS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00044 388 SUPERFAMILY RING/U-box 319 371 - -
Bach10g00044 388 Pfam Wall-associated receptor kinase galacturonan-binding 26 94 IPR025287 GO:0030247
Bach10g00044 388 Pfam Ring finger domain 326 369 IPR001841 -
Bach10g00044 388 CDD RING-H2_EL5-like 327 369 - -
Bach10g00044 388 ProSiteProfiles Zinc finger RING-type profile. 327 369 IPR001841 -
Bach10g00044 388 SMART ring_2 327 368 IPR001841 -
Bach10g00044 388 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 372 IPR046948 -
Bach10g00044 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 292 373 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00044 Bach-Chr10 364308 365637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00044 26 372 C3H Transcription Factor Family AT2G25410 34.239 2.86e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00044 - - lja:Lj4g3v3004070.1 377.481