Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00037 GCTGCATATCGCACGAAATTGCACACCTAGATTCATAGAATCTGTGCTTGCCCGAGCATCTTCCATATTTTGGGATTGCGGTCTCTCCCAGTTACAGTTGGATACTTAATGGAAGCGGATTTCGTCACGAATGGAATGGTCAGACAAGATGCTTTAGAAGCCGGTGATACTAACAATAATGATAATTTAGTAATTGACGGGGAAAGATGTGGAATATGCATGGATATTGTCATTGACAGGGGAGTTCTAGATTGCTGTCAGCACTGGTTCTGTTTTGTATGCATTGACAACTGGGCTACCATCACAAATCTCTGCCCACTTTGCCAGAATGAGTTTGAGTTGATTACTTGTGTTCCAGTATATGATACTATTGGAAACAATAAAGTTGAAGATGACTCATTCTCTAGAGATGATGACTGGTCAATTGAAGGGAAGAATAACACTCTGTCATTCCCCTCATATTATATTGATGAAAATGCAGTCATATGCTTGGATGGTGATGGGTGCAAAATTCGAAGTGGATCAGCACCTATTGAAGGAGATTCCGGTCTTGATACATCAATTGCTTGTGATTCATGTGATATATGGTATCATGCTTTTTGTGTGGGATTTGACCCTGAAGGTACATCAGACATTACATGGTTATGCCCAAGATGTGTGGCCAATGAAGTTTCTAAAAGAACAGATACCAATTCAATGGAGAGGGCAAACATGGAATGTGACCTAGATAAAGCTAATAATGAATGTCAGACAGAAGGTTCTTTTTCAGGAAAAGTGTCTGTTTCTGTTGCTGATACTGGAGAGACAGCTGTTGTTGTCTCGATGGTTGAAGAAAACCAATTGATTCCAGCATCAAGCAAAAAAAGTTCGTCATCCCTTGAAGTTGACAAGGATCCAATGACAGAATCATGTGTTTCCATGTACAACACGAATGATCATCAGAGCCTGAGAGACGAGAAAACTATTCCACCAATCATGAAGGAACAGGAACTGGAGCTGTCGTTATCACATAATATATCCTGCAGCCTACCTTCTAACTCCTTGGTGCATGATGATTTTAAGAAAAGTGCTTGTGGGGCAAGGAGTGAACCAAGTAGCTTTGATGGAACCAAGTTATGTAATGAATGGCATTTAGGAACTAGTTCATCGAGAAATGAATCTGATTTTGGTCTTCATCTTGGTTTGTCAGTGGGCTCTTTTTTGTCTGTTGATGACATGGATGAGAAAAATCAAGTAACTGATGTCCAGCAGTCAAATCCAGAAGAATCTTGGTTGAAAGGAGATGAAATTGAACCCAATGCTGGGAAGGACAATGGCAGAGTGGCAGGTGAAAAGAGAAAGCATGTTGATCACAGTATTGAATCTATTGATCAAGTTTACATAGAAGTTGATGATAAAGATGCCAAACCTGAACTTGTGGTTGAAGTTTCGCAGAAGAAAATTAGAGCTGAGGGTAGTCAAGTGATTAATCCTAAGGACTCAACTGATGCTTCTATTTCCGATAAAGTTCAAAAAAACCCCGGCATTGCAGCTGTTTCCAGAGGTGATGATTCTAAACATTGTCCTATAAATGAGAACGTTTCAACTGATATAATGAGTATAGTCAAAGGGAGAAACCAGAGGCTTCCCGAGGGACTTTCTGGCACTAATGCTCATGATAAGTTGTCTGAAAATCAAGAAAGTATGGTAGGGTTGAGGGTGAAAAAGATCATGAAAACAGTTTCTGCTGGGGAATCATCCTTGGTCGTTGAAAATCTAAGGAAAGAAATTAGAGAAGCCGTCGGTAATAAATCCTCTGAATGTTTCGAGGATAACCTTTTTGATCCAAAGCTTCTTGCAGCATTTAGGGCTGCTATAGCCACACCCAAAACAGAACCTGTAAATAAGTTACACCCTTCAACCGTAAAAGCAAAGAAGTCATTCTTGCAGAAAGGAAAAGTACGTGAACATCTAACAAAGAAAATATTCGCGAATTCAAACGGAAGAAGGAAGCGTGCATGGGACAGGGACTGTGAAATTGAGTTTTGGAAATATCGTTGCATGAGAACTACAAAGCCTGAAAAAATTGAAACTTTGAAGTCGGTTCTCGATCTTCTGAGAAAGAATTCGGAGAGCTCAGAACCAAAACAGGGTTCTGAATCTCAGCCTAACAATCCTATTCTTTCCAGGTTGTATTTAGCAGATACATCTGTTTTCCCACGGAAAGATGACATCAAGCCCCTGTCAGCACTTAAAAATTCTTCTAATTCAGAGCAGAATAAACAGCATAACCCTTCAAGAAAAGGATCAGATCTATCTATTAACAATAGTACTGTTAAAGCAACAGAACCAAATAATATTTTATCTAAGACAGGAGTTTGTTCATCTGAATACAAAGTAAGTAAGTTGAATGTAAATGGCACATCTGGTGATAATTCAGCTTCTGGTAAAGTACATTTAAGCTGCAACTCAGAAAGGGCATCAATTTCGTGTGTCGGTGTTTCCAAGGTTGACAAAAAGGAAGTAGGTGCTAAACCAAATTCTACAAAGAGTGATAAAAGAAAATGGGCTTTAGAAGTTCTTGCTAGGAAAACAGCTCCTGCAGGTGGAAAAACAGCAAATGAAAACCAGAAAGATGATGTAGTCCTCAAAGGGAATTATCCTTTACTTGCCCAATTGCCGCCAGATATGAGACCAGTATTGGCTCCCAGTCGGCACAACAAAATTCCTATATCCGTGAGGCAGACACAACTTTACCGTCTGACGGAGCACTTCTTGAGGAACATTAATCTGCCAGTCATTCGTAGGTCTGCAGATACAGAATTGGCTGTCGCAGATGCAATTAATATTGAAAAGGAGGTTGCTGACAGGTCAAACAGCAAGCTAGTGTATCTGAACCTCTGTTCACAAGAAATCTTGCATCGCTCAAACAACAGAAAATCCCATGAATCTACCGATATGAATCCATCAATCTCATCACCAGTCCTCACTGTTAGATCAGAACAAAATGCTAATGAAAATTCAACTGACCCTGCAGTCGAAGAAGCACTTAAAAATGCTGGTCTTTTGTCTGATTCACCTCCTAGTAGTCCCCATGAGAAGAGGGAAATATGCAATAATGAAGATGATCAGTCAGGGCCTGATAATATATTTGAACTGGATTCTCATCCGGAGCTGGATATTTATGGTGATTTTGAGTATGATTTGGAAGATGAAGATTACATCGGTGCTAGTGTTACAAAGAACAAAACCCCACAGGAGGATGAAGGTGGGTCAAAAATGAAACTTGTTTTCTCCACCGTGAACTTGAAAAAGTCGGATATTCCTTTGAATTGTACAAACGATGAGAAGTCTGAAAGCAACGAGGTTGCCTCCTGCTCAGCAAATTCTCATAGCGACCTAGGCCACGGGGACTCTATAATTGGTGCAGAGGTTGACAAGGCTTCTGTTCTTTCTGAGACCCTTCTTGGTGAGGGTGCTGTTGAGGCATCTGATGCAGAATTTGACGAATTATATGGCCCAGAGAAGGAACCACTTGCGAAAAAATTTCCAGATGGGGAATCAAGAAAATTACTTGGAGAGGGCCAGATAGAAGTTTTGACTGAGGACAATGGCAGTCATATTAAAGAAAAACATATCTCAGACCAAGAAATGAATGCGTCTGGCAGTTCATCTGGTCATGACGTTTTATCCAATATATCTGGTACTACTACCAGTGAAAATTTCCAAAGGAAGGTAGAGAAATCTGATGCTACTGCCAAGCAATATGACTCTGTAAATAATGTATCGAGGAAGGTAGAAGCCTATATCAAGGAGCATATCAGGCCCTTGTGCAAGAGTGGTGTGATCACAGTTGAACAATACAGGTGGGCAATCGCTAAAACAACTGATAAGGTTATGAAGTACCATTGCAAAGCCAAGAATGCCAACTTCCTCGTAAAGGAAGGTGAGAAAGTAAAGAAACTTGCAGAGCAGTATGTCGAGGCTGCCCAACAGAATAGAAAAAAATGACCTTTTTTTTTTTTTTTTGTTTTAATCAATCTTCTCGAATTATTTACACGTTGC 4044 0.4008 MEADFVTNGMVRQDALEAGDTNNNDNLVIDGERCGICMDIVIDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFELITCVPVYDTIGNNKVEDDSFSRDDDWSIEGKNNTLSFPSYYIDENAVICLDGDGCKIRSGSAPIEGDSGLDTSIACDSCDIWYHAFCVGFDPEGTSDITWLCPRCVANEVSKRTDTNSMERANMECDLDKANNECQTEGSFSGKVSVSVADTGETAVVVSMVEENQLIPASSKKSSSSLEVDKDPMTESCVSMYNTNDHQSLRDEKTIPPIMKEQELELSLSHNISCSLPSNSLVHDDFKKSACGARSEPSSFDGTKLCNEWHLGTSSSRNESDFGLHLGLSVGSFLSVDDMDEKNQVTDVQQSNPEESWLKGDEIEPNAGKDNGRVAGEKRKHVDHSIESIDQVYIEVDDKDAKPELVVEVSQKKIRAEGSQVINPKDSTDASISDKVQKNPGIAAVSRGDDSKHCPINENVSTDIMSIVKGRNQRLPEGLSGTNAHDKLSENQESMVGLRVKKIMKTVSAGESSLVVENLRKEIREAVGNKSSECFEDNLFDPKLLAAFRAAIATPKTEPVNKLHPSTVKAKKSFLQKGKVREHLTKKIFANSNGRRKRAWDRDCEIEFWKYRCMRTTKPEKIETLKSVLDLLRKNSESSEPKQGSESQPNNPILSRLYLADTSVFPRKDDIKPLSALKNSSNSEQNKQHNPSRKGSDLSINNSTVKATEPNNILSKTGVCSSEYKVSKLNVNGTSGDNSASGKVHLSCNSERASISCVGVSKVDKKEVGAKPNSTKSDKRKWALEVLARKTAPAGGKTANENQKDDVVLKGNYPLLAQLPPDMRPVLAPSRHNKIPISVRQTQLYRLTEHFLRNINLPVIRRSADTELAVADAINIEKEVADRSNSKLVYLNLCSQEILHRSNNRKSHESTDMNPSISSPVLTVRSEQNANENSTDPAVEEALKNAGLLSDSPPSSPHEKREICNNEDDQSGPDNIFELDSHPELDIYGDFEYDLEDEDYIGASVTKNKTPQEDEGGSKMKLVFSTVNLKKSDIPLNCTNDEKSESNEVASCSANSHSDLGHGDSIIGAEVDKASVLSETLLGEGAVEASDAEFDELYGPEKEPLAKKFPDGESRKLLGEGQIEVLTEDNGSHIKEKHISDQEMNASGSSSGHDVLSNISGTTTSENFQRKVEKSDATAKQYDSVNNVSRKVEAYIKEHIRPLCKSGVITVEQYRWAIAKTTDKVMKYHCKAKNANFLVKEGEKVKKLAEQYVEAAQQNRKK 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00037 1293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 112 IPR013083 -
Bach10g00037 1293 SMART ring_2 124 183 IPR001841 -
Bach10g00037 1293 SMART ring_2 34 72 IPR001841 -
Bach10g00037 1293 PANTHER RING FINGER PROTEIN 41, 151 115 1284 - -
Bach10g00037 1293 MobiDBLite consensus disorder prediction 705 736 - -
Bach10g00037 1293 MobiDBLite consensus disorder prediction 978 1012 - -
Bach10g00037 1293 ProSitePatterns Zinc finger RING-type signature. 50 59 IPR017907 -
Bach10g00037 1293 MobiDBLite consensus disorder prediction 377 413 - -
Bach10g00037 1293 SUPERFAMILY RING/U-box 26 79 - -
Bach10g00037 1293 ProSiteProfiles Zinc finger RING-type profile. 34 73 IPR001841 -
Bach10g00037 1293 SMART PHD_3 132 184 IPR001965 -
Bach10g00037 1293 MobiDBLite consensus disorder prediction 706 736 - -
Bach10g00037 1293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 191 IPR013083 -
Bach10g00037 1293 ProSiteProfiles Zinc finger PHD-type profile. 66 186 IPR019787 -
Bach10g00037 1293 SUPERFAMILY FYVE/PHD zinc finger 149 186 IPR011011 -
Bach10g00037 1293 Pfam PHD-finger 149 184 IPR019787 -
Bach10g00037 1293 MobiDBLite consensus disorder prediction 388 413 - -
Bach10g00037 1293 Pfam Zinc finger, C3HC4 type (RING finger) 34 72 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00037 Bach-Chr10 318115 328284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00037 34 94 C3H Transcription Factor Family AT3G58030 38.095 2.40e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach10g00037 PHD 6.3e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00037 - - gmx:100808102 1650.18