Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00023 ATGAGTGGGGTGGCAAGTTCAGTGGTGCACGAGGTGTTGGGACGAAGAGTTGAGGATGTGGATCAACCGATTATCGATTATATTATCAATGTCGTCGCCGACGAGGATTTTGATTTTGGAATCGATGGAGAAGGCGCTTTCGAATCTCTCGGTGAGCTCCTTGTTGGTGCTGGCTGCGTCAATGACTACTCAGAGTGCCGCTCAGTGTGCACCATATTATCTGACAAGTTTGGAAAGCATGGTTTGGTCAAGGCCAAACCAACAGTGAGAAGCCTTGCCGCACCCTTCAGAATGAATGACGGAATGGATGATGAAGAGGCTCCAAAGAAGAAGGCCGAGCCTATAGATGGTCCCATACTATCTGAGCGTGATCGAGCAAAGCTAGAAAGAAGAAAGAGGAAGGACGAACGCCAAAGAGAGGCACAATACCAAATGCATTTAGCGGAAATGGAAGCAGTCCGAGCAGGGATGCCTGTGATATGTGTTAGGCATGATGGTGGTGGCGGACCAGCCGTCAAGGATATTCACATGGAAAACTTCAATATTTCTGTTGGTGGCCGTGATCTCATTGTGGATGGTTCTGTCACACTTTCATTTGGAAGGCATTATGGCCTTGTTGGAAGAAATGGTACAGGGAAAACAACTTTCCTCAGGCACATGGCCTTGCATGCCATTGATGGCATTCCAAATAATTGCCAGATATTGCATGTGGAACAAGAGGTGGTTGGTGACAATACAACGGCCTTGCAGTGTGTCCTTAATTCTGATATTGAGAGAACCCAGCTTCTGGAGGAAGAAGCTCGTTTATTTGCCCAGCAGAGAGAGTTGGAGACCGATGACACAACTGGAAAGAGCAGGGGGAATCTGAATGGGGAAGTTGACAAAGATGCCATTTCACAAAGGCTTGAGGAAGTATACAAGAGGCTTGAGTTCATTGATGCTGATTCTGCAGAATCTCGAGCGGCATCAATACTTGCGGGCCTAAGTTTCTCCCCGGACATGCAGAAGAAGGCAACAAAAACATTTTCTGGAGGATGGCGGATGCGGATAGCTCTGGCTCGTGCACTCTTTGTAGAGCCTGATTTGTTGCTTCTTGATGAACCTACGAATCATCTTGATCTTCATGCTGTCCTGTGGCTGGAATCTTACTTGGTTAAATGGCCAAAAACATTGATAGTTGTTTCTCATGCTAGAGAATTTTTGAACACGGTAGTTACTGATATTATTCACCTACATCACCAAAAGCTGATTACTTATAAAGGAAATTATGATACTTTTGAGAGGTCTCGAGAAGAACAGATTAAAAACCAGCAAAAAGCATTAGAGGCACATGAACGTTCAAGAGCTCATATGCAGTCCTTCATTGACAAATTCCGCTATAATGCCAAGAGGGCATCGCTTGTTCAATCAAGAATCAAGGCTTTGGAGCGGATGGGTCATGTAGATGAAATTGTTAACGATCCTGACTACAAGTTTGAGTTCCCAACTCCAGATGATAGACCAGGACCACCTATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGCCCGATTCTATTTAAGAATTTAAATTTTGGGATTGATCTGGACAGCCGTATTGCAATGGTGGGAGCCAATGGTATAGGCAAATCAACTATACTTAAGTTAATTGCTGGGGAACTACAACCAAGTTCTGGGACAGTTTTCCGTTCTGCTAAGGTTCGTATAGCAGTTTTTAGTCAGCACCATGTCGATGGACTGGACTTATCTTCAAATCCCCTTCTGTATATGATGCGGTGCTACCCTGGAGTTCCTGAACAGAAGCTTCGAGCTCACTTGGGTTCTTTTGGTGTAACTGGAAACCTTGCTCTTCAACCAATGTATACCTTGTCAGGTGGCCAGAAAAGCAGGGTAGCATTTGCAAAGATAACTTTCAAGAAACCACACATAATTTTACTTGATGAACCATCCAATCATCTGGACTTGGATGCTGTTGAGGCACTAATTCAAGGTCTAGTAATTTTCCAAGGAGGCATTCTCATGGTGAGTCACGATGAACACCTCATATCTGGGAGCGTGGAGGAGCTATGGGTTGTATCCCAAGGAAAAGTGACACCGTTCCATGGCACCTTCCAAGATTATAAGAAAATACTCCAGTCATCTTGAAAAGATAATCCAGTCAACCGTTTTTTTTTACTCTTCTTGGATAGATGCTGTGTAGACTACTAGACTGGTCACGGGAAGCGAGAATGATGTTGATTCTTGCATGGCATAAATTTCTACTGTTCGTCTCTGCTGCCATAGATGAGAATATAACACAATTTGGAAGTTTCCCCATTCGAATTATGAGGGGAAAAATATTCCTTAGTTGGATTTTGA 2364 0.4395 MSGVASSVVHEVLGRRVEDVDQPIIDYIINVVADEDFDFGIDGEGAFESLGELLVGAGCVNDYSECRSVCTILSDKFGKHGLVKAKPTVRSLAAPFRMNDGMDDEEAPKKKAEPIDGPILSERDRAKLERRKRKDERQREAQYQMHLAEMEAVRAGMPVICVRHDGGGGPAVKDIHMENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMALHAIDGIPNNCQILHVEQEVVGDNTTALQCVLNSDIERTQLLEEEARLFAQQRELETDDTTGKSRGNLNGEVDKDAISQRLEEVYKRLEFIDADSAESRAASILAGLSFSPDMQKKATKTFSGGWRMRIALARALFVEPDLLLLDEPTNHLDLHAVLWLESYLVKWPKTLIVVSHAREFLNTVVTDIIHLHHQKLITYKGNYDTFERSREEQIKNQQKALEAHERSRAHMQSFIDKFRYNAKRASLVQSRIKALERMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGANGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVIFQGGILMVSHDEHLISGSVEELWVVSQGKVTPFHGTFQDYKKILQSS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00023 716 CDD ABCF_EF-3 506 698 - -
Bach10g00023 716 Gene3D - 170 468 IPR027417 -
Bach10g00023 716 FunFam ATP-binding cassette sub-family F member 3 468 716 - -
Bach10g00023 716 FunFam ABC transporter F family member 3 127 451 - -
Bach10g00023 716 ProSitePatterns ABC transporters family signature. 342 356 IPR017871 GO:0005524|GO:0016887
Bach10g00023 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
Bach10g00023 716 MobiDBLite consensus disorder prediction 273 292 - -
Bach10g00023 716 Pfam ABC transporter 409 489 IPR032781 -
Bach10g00023 716 Gene3D - 469 716 IPR027417 -
Bach10g00023 716 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 150 715 - -
Bach10g00023 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 506 715 IPR003439 GO:0005524
Bach10g00023 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 438 IPR003439 GO:0005524
Bach10g00023 716 Pfam ABC transporter 194 370 IPR003439 GO:0005524
Bach10g00023 716 MobiDBLite consensus disorder prediction 99 139 - -
Bach10g00023 716 Pfam ABC transporter 523 653 IPR003439 GO:0005524
Bach10g00023 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 708 IPR027417 -
Bach10g00023 716 CDD ABCF_EF-3 175 415 - -
Bach10g00023 716 ProSitePatterns ABC transporters family signature. 625 639 IPR017871 GO:0005524|GO:0016887
Bach10g00023 716 SMART AAA_5 199 416 IPR003593 GO:0016887
Bach10g00023 716 SMART AAA_5 531 698 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00023 Bach-Chr10 216882 224889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00023 462 667 Calmodulin-binding Proteins AT2G36910 25.926 2.40e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00023 K06158 - qsa:O6P43_024074 1266.91