Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00008 ATGTCTTCATCTTGTTCATCACCGATTCTTTGTTTGGGGCAAGAAGGCTCACCCGCACTTGAGCAGCATCTCCAATTCATTGTACAGAGCTGGCCCGAGTGGTGGGTGTACGCCATCTTTTGGCAAGCTTCCAGAGATGGTAATAGCCGTCCATTATTACATTGGGGCGATGGTCACTTCCGTGGTAGCAGGGAGTTGATGTCCAAGGGCAAGGCCATCACCACCACCAATAGCAAGGAGCGCTACCCAGGCGACAATGAAAATTGCGGCGACATGGACATGGACAGATTGGTGGATATAGGCCATGTAACTGCCTCTGAATGGTTTTACACGTTATCCATGACACGATCGTTTGGCGCAGGTGATGGTACCGTAGTTGGGCGTGCTTTTAGCTCAGGCAAACATGTTTGGTTGGTTGGACTGAATGAATTTCATCAGTTGGAAGAATGTGATAGAGTTAGAGAAGCTCGTAGTCATGGCATCCAAACTTTAGTATGCATTCCCATTGCAACTGGAGTGCTTGAACTGGGTTCTTCGGACTTGATCAAGCAGGATTGGGGCCTCGTGCAATTGGCCAAATCAGTTTTTATGACCACTAACGCAGCAGCAGTTTCCCATAGTCCTCCCTGTACTGCAAGTACTGCAGTGAGTGTCCCCTCTGATCTGCAGCATAACTTAAAGAAAGAGATCATTTTAAAACACAATAAACAGCAACAGATGATGATTATGAGTAGTAGCATACAAGAGGAGAATGGAACTTCTTCCTCCGATTCTGGTCAAGGACATGAAGATGATGAGCATACTCCACTGAGGAGGCGAGGCAGATCTAGAAAGGCACCATCAGAATTGCCTCTGAATCACGTGGAGGCAGAGAGACAGCGACGAGAGAGACTTAATCAAAGATTCTATTCTCTCCGTTCTGTTGTCCCCAACGTATCCAAGATGGACAAAGCTTCCCTCCTTTCAGATGCTGTGGCCTACATCAATCAACTAAAGGCCAAAATTAATCAGCTCGAGAGCAAGGCCAAGTTCCAGCATCACCATCACCAACATCAACCGACACATGAATCTTCACAATCACTGTATGATAGCAATATTTACACCAGTACCATAGGAGTTGAGGTCAAGATCTTGGGCATGGATGCCATGATAAGGGTTCAATGCCTGGATGTGGATCACCCATCTGCAAGGTTGATGGATGCTCTAAGAGATCTCAATTTAAAAATTCACCATGCCAGCATATCTAGCGTCAAAGACCTCATGCTACAAGATATTGTGGTTAGGGTTCCTCACGACCTCATGACAGAGGAGGTAATGAAAAATGCCATTCTACAAAGGTTGCAGAATACTAGTCCGATCTTTCCCCTTTCTTTCTTACCATGA 1383 0.4599 MSSSCSSPILCLGQEGSPALEQHLQFIVQSWPEWWVYAIFWQASRDGNSRPLLHWGDGHFRGSRELMSKGKAITTTNSKERYPGDNENCGDMDMDRLVDIGHVTASEWFYTLSMTRSFGAGDGTVVGRAFSSGKHVWLVGLNEFHQLEECDRVREARSHGIQTLVCIPIATGVLELGSSDLIKQDWGLVQLAKSVFMTTNAAAVSHSPPCTASTAVSVPSDLQHNLKKEIILKHNKQQQMMIMSSSIQEENGTSSSDSGQGHEDDEHTPLRRRGRSRKAPSELPLNHVEAERQRRERLNQRFYSLRSVVPNVSKMDKASLLSDAVAYINQLKAKINQLESKAKFQHHHHQHQPTHESSQSLYDSNIYTSTIGVEVKILGMDAMIRVQCLDVDHPSARLMDALRDLNLKIHHASISSVKDLMLQDIVVRVPHDLMTEEVMKNAILQRLQNTSPIFPLSFLP 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00008 460 PANTHER MYC 16 446 IPR045084 GO:0003700|GO:0006355
Bach10g00008 460 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 196 IPR025610 -
Bach10g00008 460 MobiDBLite consensus disorder prediction 259 292 - -
Bach10g00008 460 MobiDBLite consensus disorder prediction 246 292 - -
Bach10g00008 460 Coils Coil 321 348 - -
Bach10g00008 460 SMART finulus 288 337 IPR011598 GO:0046983
Bach10g00008 460 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 283 355 IPR036638 GO:0046983
Bach10g00008 460 Gene3D - 276 347 IPR036638 GO:0046983
Bach10g00008 460 Pfam Helix-loop-helix DNA-binding domain 286 332 IPR011598 GO:0046983
Bach10g00008 460 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 282 331 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00008 Bach-Chr10 59833 61215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00008 20 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 33.559 4.59e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g00008 bHLH-MYC_N 1.7e-45 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00008 - K13422 cave:132176170 423.32