Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00005 ATGAAAGGGCGGTCCCACCGCCTTCAGAGTTCGGACCCTCCCGACGACTGGATTGACGGTTCTTGGACTGTGGATTGCATATGTGGTGTGAATTTTGACGACGGGGAGGAGATGGTTAAATGTGACGACTGCGGTGTATGGGTTCATACGCGGTGCTCTCAATATGTCAAGGGAGATGACTCATTTGCCCGTGAATCAAGAGCAAGAGTATTCGCACTGACACTGAGGAAACCGAGGTTGCACAATTGTTAG 252 0.5079 MKGRSHRLQSSDPPDDWIDGSWTVDCICGVNFDDGEEMVKCDDCGVWVHTRCSQYVKGDDSFARESRARVFALTLRKPRLHNC 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00005 83 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 69 IPR013083 -
Bach10g00005 83 Pfam PHD-finger 26 58 IPR019787 -
Bach10g00005 83 SUPERFAMILY FYVE/PHD zinc finger 14 56 IPR011011 -
Bach10g00005 83 PANTHER UNCHARACTERIZED 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00005 Bach-Chr10 34651 34902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00005 24 52 PHD Transcription Factor Family AT5G22260 58.621 6.38e-08 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach10g00005 PHD 6.7e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00005 - - pcin:129322189 139.428