Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04408 ATGCAGCGACTGAAGACTATGATGGGGTCCCGCGACTACATCCAAGCATTGGAACATGAACGCCGCAAGATTCAGGTGTTCTCCAAAGAGCTTCCTCTTTCCTTGGACCTCGTCACACAAGCCATTGAAGCGTGCAGGCAGCAGTTGTCTGAGACGACGACGGAGTACAACATGAACGGACACAATTCGGAGTGTTCGGAGCAGACAACATCAACCGACAACGGTCCTGTCTTGGAGGAGTTCATCCCAATTAAGAAGAGACCGTCATCTCCACATGAAGAAGAAGAAGAAGAAGAAGATGATGATGACGATGAACAACATTCCCATCATCATCGCCACAAGATCTCGAAGGATAACACTGACAAGCGGAAATCAGATTGGCTTAGATCCGTTCAGTTGTGGAATAATCCAGAACCCTCATCACCACCTCATCAGGAGGTGAACAATAAGAAAGGTGGTGCGGTGGAAGTGAAGAGAAGTGGAAGTGGTGGTGCTTTTCAGCCATTTCACAAGGAGAAGGAGGAAAGAGTAGGTGGTGGTGGCGGCAAGGCAATTGCAAGTGATGATCTGAAACCACCGTGTTCCTCCAACAGCAGCAAGAAGGAAGAGAAAGAGGGGCAGAGGAAGCAACGCCGTTGCTGGTCTCAGGAGTTGCACAAACGATTCTTGCAAGCCCTTCAACAACTTGGAGGCCCTGATTCTGCCACACCGAAGCAAATCAGGGAGCTTATGAAAGTTGATGGCCTCACTAATGACGAAGTCAAAAGCCATTTACAGAAATACCGGTTACACACTAGAAGACCTAGTGGCATAGTTCACAACAATGGCAGTCCACAAACGACGCCGTTTGTCCTAGTAGGCAACATTTTTGTTCAACCGCCAGAATATGCCGCAGCGGCCGTGGCCACGTCAGCAGATCTAGCACCTGCCGGAATATATGCGCCTGTAGCCACGCATCCTCCTCCACCTCCTCCCCGGACGGCGGCTGGTTCCACTAGAAGACCGCAGTTGAAGAAATCATCAAACCACATGCGTGAAGATCATCATCATTCACACTCGGAAGAAGATAGGGCTAATCATTCAAACTCTCCAGCTTCATCATCATCCACACACACCACCACAACTACTTCCCCTGCCTATTGA 1143 0.4952 MQRLKTMMGSRDYIQALEHERRKIQVFSKELPLSLDLVTQAIEACRQQLSETTTEYNMNGHNSECSEQTTSTDNGPVLEEFIPIKKRPSSPHEEEEEEEDDDDDEQHSHHHRHKISKDNTDKRKSDWLRSVQLWNNPEPSSPPHQEVNNKKGGAVEVKRSGSGGAFQPFHKEKEERVGGGGGKAIASDDLKPPCSSNSSKKEEKEGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSGIVHNNGSPQTTPFVLVGNIFVQPPEYAAAAVATSADLAPAGIYAPVATHPPPPPPRTAAGSTRRPQLKKSSNHMREDHHHSHSEEDRANHSNSPASSSSTHTTTTTSPAY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04408 380 MobiDBLite consensus disorder prediction 315 329 - -
Arst9g04408 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 266 IPR017930 -
Arst9g04408 380 MobiDBLite consensus disorder prediction 55 213 - -
Arst9g04408 380 MobiDBLite consensus disorder prediction 129 147 - -
Arst9g04408 380 FunFam Myb family transcription factor 208 266 - -
Arst9g04408 380 NCBIfam myb-like DNA-binding domain, SHAQKYF class 209 264 IPR006447 GO:0003677
Arst9g04408 380 Pfam Myb-like DNA-binding domain 211 262 IPR001005 -
Arst9g04408 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 346 IPR044787 GO:0003700|GO:0006355
Arst9g04408 380 MobiDBLite consensus disorder prediction 339 359 - -
Arst9g04408 380 Gene3D - 208 266 - -
Arst9g04408 380 MobiDBLite consensus disorder prediction 55 76 - -
Arst9g04408 380 MobiDBLite consensus disorder prediction 314 380 - -
Arst9g04408 380 MobiDBLite consensus disorder prediction 195 213 - -
Arst9g04408 380 MobiDBLite consensus disorder prediction 360 380 - -
Arst9g04408 380 SUPERFAMILY Homeodomain-like 207 267 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04408 Arst-Chr9 119436864 119438630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04408 1 322 G2-like Transcription Factor Family AT1G68670 47.472 1.71e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst9g04408 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04408 - - adu:107468029 638.647