Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04402 ATGGCCGGATCATCGTGGTTGGTAGACAAAAGTAGAATTGCAACCAAAATAAAGAGTGCATCTGGAGCAAGTGGGAAAGTTTTATGGAAAAGCAATCCTACCAGAACTTGTCCGAATTGTCAACATGTTATTGATAACAGTGATGTGGCACAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAAATAATATCGCACTTGCTTGCAAAAGTTGGTGCAGCAGGTTCAGAGCCTCACCCTTTCATTGATGAATTTATTGCTACTCTTGAAGTGGATGATGGAATTTGTTATACACATCCTAAACATTTACCAGGTGTCAAGCAAGATGGTAGTGCTACACACTTTTTCCACAGATCAATCAAGGCTTATAATACCGGCAATCGAAAGCGTCGGAAAATAAATGACCAGGACTCTGGCGATGTCCGTTGGCACAAGACTGGAAAAACTAAACCTGTCATCTCGGACGGGGTTCAGAGAGGCTGTAAAAAGATTATGGTTCTATATATGACTTCAGTTAGAGGAGTAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTCGGAACAGACGAAGATGAAAAGGAAGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAACAAGTTAAGTTTGCTGAAAAAGATGATCATGATGTTCCTGGAACCAATGAAGCAACTGTTGTGAAAGATGATCCAGTCACTTCGGAACCTCCTCATAGTGAAAAGCAATGTTCAGATCTCGACATAGGAGAAAAATCACATCAGATTCCTCAGGGTCCTCAGACAGATTGTGTAGAAGACATTCAAGCCGAGTGTGAAGAGATTGTGAAAACTGATGTAGCCATGGCAGATGCTCAAAATAATGAAGGAATGGATAATGTAGAAAATAATGCTGATGGAGAACAAAAATGGTGGGACAGTGAGTCACAGAATTTGTTAGATTCACAACAACTTGTTGAAGCATTGGCCTTGTGTGATGATCTCCTCCATAGCCAGTGTTCCAATAAGGATGATGAAAATGTAGAACACAAGGAGCACTTGAGTCTTTCCATCTATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATCTTGAAGAGTGCCAAAACCTTAATCTTGATCCTGCAAACGTAGAGCTCGAGACACCACCTTCAGAGTTTCGACTAAGTCAGCTGGAATTTGGTTCACAGGATAGCTTTGTTTCCTTGAGCGGCGGCAAGGCAGTCGACTAA 1254 0.4139 MAGSSWLVDKSRIATKIKSASGASGKVLWKSNPTRTCPNCQHVIDNSDVAQEWPGLPKGVKFDPSDQEIISHLLAKVGAAGSEPHPFIDEFIATLEVDDGICYTHPKHLPGVKQDGSATHFFHRSIKAYNTGNRKRRKINDQDSGDVRWHKTGKTKPVISDGVQRGCKKIMVLYMTSVRGVKAEKTNWVMHQYHLGTDEDEKEGEYVISKVFYQQQVKFAEKDDHDVPGTNEATVVKDDPVTSEPPHSEKQCSDLDIGEKSHQIPQGPQTDCVEDIQAECEEIVKTDVAMADAQNNEGMDNVENNADGEQKWWDSESQNLLDSQQLVEALALCDDLLHSQCSNKDDENVEHKEHLSLSIYAHLGPEHLKKDLEECQNLNLDPANVELETPPSEFRLSQLEFGSQDSFVSLSGGKAVD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04402 417 Coils Coil 416 417 - -
Arst9g04402 417 MobiDBLite consensus disorder prediction 242 257 - -
Arst9g04402 417 FunFam NAC domain-containing protein 8 65 218 - -
Arst9g04402 417 SUPERFAMILY NAC domain 41 214 IPR036093 GO:0003677|GO:0006355
Arst9g04402 417 Gene3D NAC domain 65 218 IPR036093 GO:0003677|GO:0006355
Arst9g04402 417 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
Arst9g04402 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 376 IPR044799 GO:0003700
Arst9g04402 417 MobiDBLite consensus disorder prediction 223 269 - -
Arst9g04402 417 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04402 Arst-Chr9 119341650 119345625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04402 32 218 NAC Transcription Factor Family AT1G28470 57.513 4.06e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst9g04402 NAM 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04402 - - gmx:100787702 649.047