Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04376 ATGGCTGAAGGATGTGGTGGAAACTCAGTTGCAACCACTTCTCCTACTTCATTCAATTGGTGGTACCTCCATGCAAATCACGCTACTAATACTAACGCATATAATAATAATAATAATAATTCTTCATCATGTTCTTGTGACGAGGATATATCTGTTTCAACTTCTTTCACTAATGCCTCCAACCATTCAACCCTCACTGTTGATTCTTCCCGAAGGCTTCTTGATCCTTCCTCCAACAACAACCACTTCTTGCCCGAACATGCTGACGATAATCATCTTTGGAATCATGTTCTTTCAGCTGTTGGATCAAACGGGGAGTTGCAGAACAATGAAGAAATGGGAGAAATGAAGTTTCTGGATGCACTATCATCTAAGAACATGACAAGCTCTATGTTTGAAGAACCGGCATGTGACTACTTGAAGAAACTTGACACCACCACTAGTTGGGAATATAGTGGTGGATCAACTTCTTCATCATTCAACAACAGTTTTGAGAAGCACTTGAATAATAATAATAATAATAATAATGGGTTCAGTGATGATGCATTGATTGAGAATAATGAAAGGTTGACTAAGTTATCTAATCTTGTTAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGTAGCCACTTTGATCATCCACCAACAAATATTAATAATCATCATCATCATGACCCTAATTGTAATTTCAAGCAACAAGTTTTTATTGGAGATTCCACATCATACCCTCCAATCAGTAGCTATGATCATCCCACAAAGGTGAAGGAAGAATTTCATCATCATCATCAAACAAATAGTGGATTTCAAAATGGACTAATTAATGGTCTTTCTTCAGTGATGGGAGGAGGAGATAGTAGTGGTAATAAATTTTACCATGATTTGCCAAACCTTTCTTCATGCACAAGAAACATCTCAGATGTTATTTCCTTTAATAGTAGGCTTGGGAGGCCAGTTCTTGGAATCCATGCACAAAAGCCTAATATCAAATACATCAATAATTTATCTGAATCAAAGAAGCACCAAGGTCTTCAAACAACATCCCCGATAAATAGAAGTAATAATGGAAGAATAGAGGGGACAACAGCTCGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGAAGCAATTTTGAAGAAGCCTAAGCAAGATACATCCACAGCTTCTTCTACAAAGGTGCAAGCACCCAAAGTCAAGCTGGGGGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGACACAGCTTCGGTGCTGTTTGAAGCAATTGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTAAGCAACCCTTACTTGAAGTCTAATTCCCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATCACCATAAGGAGGATGCAAAATTAGACCTTAGGACTAGAGGACTTTGTTTAGTTCCAACTTCATGTACTCCTCTTATTTACAGAGAGAACAGTGGACCAGATTATTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1533 0.3862 MAEGCGGNSVATTSPTSFNWWYLHANHATNTNAYNNNNNNSSSCSCDEDISVSTSFTNASNHSTLTVDSSRRLLDPSSNNNHFLPEHADDNHLWNHVLSAVGSNGELQNNEEMGEMKFLDALSSKNMTSSMFEEPACDYLKKLDTTTSWEYSGGSTSSSFNNSFEKHLNNNNNNNNGFSDDALIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDHPPTNINNHHHHDPNCNFKQQVFIGDSTSYPPISSYDHPTKVKEEFHHHHQTNSGFQNGLINGLSSVMGGGDSSGNKFYHDLPNLSSCTRNISDVISFNSRLGRPVLGIHAQKPNIKYINNLSESKKHQGLQTTSPINRSNNGRIEGTTAREVKKKRSEESSEAILKKPKQDTSTASSTKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKSNSHKDPWGSLDRKDHHKEDAKLDLRTRGLCLVPTSCTPLIYRENSGPDYWTPAYRGCLYR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04376 510 CDD bHLH_AtbHLH_like 402 444 IPR045239 -
Arst9g04376 510 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 160 488 - -
Arst9g04376 510 MobiDBLite consensus disorder prediction 363 382 - -
Arst9g04376 510 MobiDBLite consensus disorder prediction 383 397 - -
Arst9g04376 510 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 402 452 IPR036638 GO:0046983
Arst9g04376 510 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 387 436 IPR011598 GO:0046983
Arst9g04376 510 MobiDBLite consensus disorder prediction 342 398 - -
Arst9g04376 510 MobiDBLite consensus disorder prediction 342 362 - -
Arst9g04376 510 MobiDBLite consensus disorder prediction 207 228 - -
Arst9g04376 510 Gene3D - 400 455 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04376 Arst-Chr9 118953042 118957521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04376 24 510 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.134 1.03e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04376 - - gmx:100527800 591.652