Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04323 ATGTCTAATGAGGATTATGTAGATGACACCAATAATGTTGACGGGTTTCACGGGAATTTGGAGAATCCCTTGAGAAACAGTGATGAGCTCCTGGACGACGATATCTTCATGGATGCTAACTTGGCAAATGCAGAAGTTGGTGCTTCTGAATCCAATGAAGGTACCCATTTTGATCAATTGGATGAATCTTATAAGATTGACGGGTGGGAGGACATAGGAAAGACTGAGTTCTTGAATATTGTAGATGTTGATATAAAAAGATATCATTTCAGTGATCTAGGAGTGGCTTTTGATTTCTACAATGCATTTGCCAAGTCAAAGGGATTTAGTGGTCGAAAAAGTAAGACGCGAAAGCACAATGGGATAATCAATCGACAGAATTTTGTTTGTTGTCGCGAGGGCTTCCGACGAAAAAAGGCAGATAATATGCATACCAGAAAACAAGAGCCTAGAGCTGAAACTAGATGTGGCTGTAAGGCAAAGGTTCAGGTGTCATTTGACGTTGTTAGTGGTCGCTGGATTGTTTCAAAATTTTCTGATTTGCACAATCATGACCTTCTTCCTCCAATTTTTACTGCAATGCTTCCTGGTCACAGAAAAATACCTGCTGCAGATATTGAGCAAATAAATATAATGAGGAAGGGTGGATTAGGCACTGCACATATTTTTGCAGCACTCTCAAGCCAATCTGGTGGTCACCACAATGTTCCCTTTTTGCCCAGGGACTTGTACAATCAAGTCGCACAGCAACGTCGACGATTGAAGGGTGATGCTAGTGCAGCTCTTCAATTTTTGAGGAAGATGAAGTCCATTGATCCTGTCATGGTTATAAGATATGAGGTTGATAGGTTTCACTCGATAAAGAATTTATTTTGGTGTGATGGAATAAGCCAAATGGATTATCAATTGTTTGGTGATGTATTGGCTTTTGACGCTACTTACAAGAAGAACAAATATCATTGTCCGCTTGTCGTTTTTTCGGGTGTTAATAACCATAACCGCACAGTTGTCTTTGCGGCCGCTCTTGTGTGTGATGAGTCAGAGCAAACATATATTTGGTTGTTAAAAAGTTTACTGGAAGCAATGAAGGGGAAGGCCCCAATTTCAGTTATCACAGATGGTGCCCTTTCAATGAAAAATGCAATCGAAAAAATTTTTCCTAATGCACATCATCGCCTATGTGCTTGGCACCTTATTCGCAATGCCACAAGTAATGTAGGTAATCCTAGGTTCACATCGCAGTTTAAGAAGTGCATGCTGGGTGATTACGAGGTTGGTGTATTCCGTAGTAAGTGGGATCGGATGGTTGAAGAGTTTGATGTGCAAGACAAGCAATGGATAATTGATATGTATGATAACCGTCATAGTTGGGCAACAGCACATATCCGTGGGAAGTTCTTTGCTGGGTTTAGGACCACTTCTCGATGTGAGGGGTTGCACTCAGTTATTGCAAAGTATGTCAAGTCCAGGTATAATTTAAGAGATTTTGTAGAGCACTTTGATAGATGTGTTGCCTACATTCGTTTCAAAGATAGTCTAGCAGACTTTGAATGTGCACATGGAGTACCTGTGATGCAAACTCATTTATTGTCATTGGAGAAGTCTGCAGCTAATTTATATACAAGAGAGGTATTTTTTCTATTTCGCCCTATTATTATAAGGTCTGGTTCAATGAAAGTGTTAGATTGCATTGATGTTGGTTCTTATATGTTATACACGGTGGTTAAGTATGGTAGTCCTAACGATACATGGCAAGTATCTTTCTGTGATTTACCAATGGAGTTTACTTGCTCCTGTATGAGGATGGAGTCATTTGGCATTCCTTGCGAACACATTCTATCTGTTTTAGTTACACTTGACATTTGTGAATTGCCAAAATGTTTAGTTCTAGATAGGTGGACCAAAAATGTGAAACAACAAATACAAGATACAAAGGGGTTCACTTGGGATTGCTTAAAGTCTACCCAATACTGGTGTTTGATGGACTGGTTTAGATTGGTGGCTACACTATCAGCAGGTAAAGATGATAGGTTCAGGAGCATGAGGGATTGGGCGATAAACACAGTGGATAAAATGAAAGCCGATGATACTGCTAGTGCAGTTGCTTCTAATAGTGCAATTCCTGCCACTCATACAGATCCTCGTGACCCCCCAATTCGTAGAAGAGCTAAGGATCGTGCCGGACAACGGTGTAGTATATGCCGGGAGCTCGGACATAACAAAACTACATGTCCAGATCGAAGTAAGTATGATAGGGGTTCACATGAACGGCATAGTCTACTTACAGATGATGATGCATATGAGGCTATGTGGGATGAGGAAGAAGACTTCATTTATGAGGAAGATGAAGGTGAATGTGCGGTAAATTCTAGTTCTGAATCTAGCAGAGATCAAGATATGGAGATAGATGACTCTAATTATGAATTTGGAAATGAGGACGATGGAGCCAATGAAATTAATTAG 2463 0.4028 MSNEDYVDDTNNVDGFHGNLENPLRNSDELLDDDIFMDANLANAEVGASESNEGTHFDQLDESYKIDGWEDIGKTEFLNIVDVDIKRYHFSDLGVAFDFYNAFAKSKGFSGRKSKTRKHNGIINRQNFVCCREGFRRKKADNMHTRKQEPRAETRCGCKAKVQVSFDVVSGRWIVSKFSDLHNHDLLPPIFTAMLPGHRKIPAADIEQINIMRKGGLGTAHIFAALSSQSGGHHNVPFLPRDLYNQVAQQRRRLKGDASAALQFLRKMKSIDPVMVIRYEVDRFHSIKNLFWCDGISQMDYQLFGDVLAFDATYKKNKYHCPLVVFSGVNNHNRTVVFAAALVCDESEQTYIWLLKSLLEAMKGKAPISVITDGALSMKNAIEKIFPNAHHRLCAWHLIRNATSNVGNPRFTSQFKKCMLGDYEVGVFRSKWDRMVEEFDVQDKQWIIDMYDNRHSWATAHIRGKFFAGFRTTSRCEGLHSVIAKYVKSRYNLRDFVEHFDRCVAYIRFKDSLADFECAHGVPVMQTHLLSLEKSAANLYTREVFFLFRPIIIRSGSMKVLDCIDVGSYMLYTVVKYGSPNDTWQVSFCDLPMEFTCSCMRMESFGIPCEHILSVLVTLDICELPKCLVLDRWTKNVKQQIQDTKGFTWDCLKSTQYWCLMDWFRLVATLSAGKDDRFRSMRDWAINTVDKMKADDTASAVASNSAIPATHTDPRDPPIRRRAKDRAGQRCSICRELGHNKTTCPDRSKYDRGSHERHSLLTDDDAYEAMWDEEEDFIYEEDEGECAVNSSSESSRDQDMEIDDSNYEFGNEDDGANEIN 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04323 820 MobiDBLite consensus disorder prediction 697 727 - -
Arst9g04323 820 MobiDBLite consensus disorder prediction 780 820 - -
Arst9g04323 820 Pfam MULE transposase domain 307 401 IPR018289 -
Arst9g04323 820 SMART 26again6 595 622 IPR006564 GO:0008270
Arst9g04323 820 Pfam SWIM zinc finger 595 616 IPR007527 GO:0008270
Arst9g04323 820 ProSiteProfiles Zinc finger SWIM-type profile. 572 620 IPR007527 GO:0008270
Arst9g04323 820 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Arst9g04323 820 PANTHER OS01G0519700 PROTEIN 90 641 - -
Arst9g04323 820 SUPERFAMILY Retrovirus zinc finger-like domains 717 751 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04323 Arst-Chr9 118290033 118292691 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst9g04323 MULE 2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04323 - - adu:107465142 1696.79