Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04282 ATGGGGAGGAAAGGGAGTTGGTTCTCTGCTGTGAAGAAAGTTTTTGGTTCTGAAAACAAAAAGGACCAGGAAAAGAACACAAAACCACAGAAAACCCATAGTCATGGCCATAGCCATAGCAATAGTAAGTCCAAATTAGGATGTTTTGGACACCATGATAACAATGAAGCCGGAAATGAAGCGCAGGGAATAGTAGTTGTTCCGGCGCTTCCGCGTAAGAAAGAACCAAAACAAGCAAGAGTGGCAGGTCAGAATGAGCCGGACCAGCAGGCTTTCTCTTTGGTCTTGGCTACTGCTGTCGCAGCAGGTGCTGCTGTCGCGGCCGCGGCTGAGGCTACTCGTCCCAAGACTGTGACGCCTCGTCGCCGTGAAAAACTGAAGGATGATGAAGCAGCAATCATAATTCAGACAGCCTTCCGCGGATATCTGGCGAGGAAAAAACTGCGAGGCTTGAGAGGTTTGTCGAGGTTGAGAACATTGGTAAGAGGGCAATCTGTGAAAAGGCAATCAGCCTCTACCTTGCAATGCATGCAGACTCTTTCGAAACTGCAGTCTCAAGTTCGCGCGAGGAAGATCAGAATGTCTGAGGAGAACCAGGCACTTCAGCGCCAGCTCCTGCAGAAACGGGAGAAGGAGCTTGAGAAATTGCAAGCTGCTCAAGCTGAATGGGATCATAGAAAGGATTCAAAAGAGCAAGTTGAAGCAAAATTGTTGCACAGGCAAATTGCTACCATGAGAAGGGAGAAGGCTCTGGCTTATTCAATGACACATCAGCAAACTTGGAGGAACAATCTAAAATCAGGCACGAACGCCTCGTTTATGGATCCAAACAATCCTCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGTAAGGCCATGGGAGGGACAAAGCACATTCCAACACAATGAGCCTGCACCTCTAATTAGCACAGCCAGAAGCACGCTATCAGTTGGCGAAATAACCAAACTGTATACTCTACGCGACGATGCTAACATTAGCAAGAACTCCCCTAGGGCCATAAAAACAGGCCGGTCGCGCAGCGGCCTTAACTCGCCCTCAAATGTACTCACCCCATCAAAGTCCACAGCCTTTTTCACAGCTTCCCCCACTCCAAGGAGTCTCAGGGCAGCTAGTCCTAAACTTGGTTCCTGGGGTGGTGATGGAGACAAGAGGAATGCATTTGGCATTAGGAGGGAGGGCAACCGTAGGCACAGCATCGCCATTTCGCCTGCGAGGGATGATGAGCTCCTTAACTCACCTATGAACAGATCACCAAAGAAAGCAGCAGCAACAAAGGCCTCAAAATCCTTCAACATGGCAAAGAGCAGTGTTAGCTCATCTGAGAAATCAAGTCCTGCTGCTGCAGTAAACAAGAGACTCTCTTTGTCTCAATCTCCAACTTCAAATTCAAGAAGGCTTTCTACTCCAGGCAAGGTGGGGACAATTTCCAACAAGAGCAATGCTGCTGGTGCTACTATGAGAAAGTGA 1494 0.4873 MGRKGSWFSAVKKVFGSENKKDQEKNTKPQKTHSHGHSHSNSKSKLGCFGHHDNNEAGNEAQGIVVVPALPRKKEPKQARVAGQNEPDQQAFSLVLATAVAAGAAVAAAAEATRPKTVTPRRREKLKDDEAAIIIQTAFRGYLARKKLRGLRGLSRLRTLVRGQSVKRQSASTLQCMQTLSKLQSQVRARKIRMSEENQALQRQLLQKREKELEKLQAAQAEWDHRKDSKEQVEAKLLHRQIATMRREKALAYSMTHQQTWRNNLKSGTNASFMDPNNPHWGWNWLERWMAVRPWEGQSTFQHNEPAPLISTARSTLSVGEITKLYTLRDDANISKNSPRAIKTGRSRSGLNSPSNVLTPSKSTAFFTASPTPRSLRAASPKLGSWGGDGDKRNAFGIRREGNRRHSIAISPARDDELLNSPMNRSPKKAAATKASKSFNMAKSSVSSSEKSSPAAAVNKRLSLSQSPTSNSRRLSTPGKVGTISNKSNAAGATMRK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04282 497 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Arst9g04282 497 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Arst9g04282 497 SMART iq_5 127 149 IPR000048 GO:0005515
Arst9g04282 497 MobiDBLite consensus disorder prediction 15 31 - -
Arst9g04282 497 MobiDBLite consensus disorder prediction 393 412 - -
Arst9g04282 497 MobiDBLite consensus disorder prediction 337 497 - -
Arst9g04282 497 Coils Coil 191 226 - -
Arst9g04282 497 PANTHER IQ-DOMAIN 5-RELATED 1 480 - -
Arst9g04282 497 MobiDBLite consensus disorder prediction 431 497 - -
Arst9g04282 497 MobiDBLite consensus disorder prediction 337 375 - -
Arst9g04282 497 Gene3D - 119 154 - -
Arst9g04282 497 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04282 Arst-Chr9 117756352 117759467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04282 1 481 IQD Protein Family AT5G03040 39.715 4.04e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04282 - - gmx:100807725 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g04282 9 117756352 117759467 Arst9g04282 9 117756352 117759467 ECH