Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04274 ATGCAAAACAAAATGGAATACAAACTCAATTCTTCTTCATCGATTCCAATAATCCACGTCCCCACAAAGATCTCAAATTCTCCACCTCCTCCTTCTTCTTCTCCTCCTCCCATTTCACAATCTCAATCTCCAACTTCCTGTGCTCCGCCGTCGCCGCCTCCACCTGTGGTGGTGAGCCCTTGCGCCGCCTGTAAGATCCTCCGTCGCCGCTGCGTTGAGAAGTGTGTTCTTGCTCCTTACTTCCCTCCAACTGATCCACTCAAGTTCACCATTGCCCATAGAGTCTTTGGAGCAAGTAACATTATCAAGTTCTTGCAGGAACTACCAGAAAACCAAAGGGCAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAATTAGGGACCCAGTTTATGGTTGTGCAGGAGCAATATGCCAACTCCAAAAGCAAGTGAGTGAGCTTCAAGCACAATTGGCAAAAGCACAAGCTGAGCTTGTTAACATGCACTGCCAACAAACTAATTTGGTTGCACTCATTTGCATGGAAATGAGTACTAGTAATACTCATCAATCATCTTCACATCAGGAACAACACCACATGATGATGATTCAGCCTCAGAATAATAATAACAATAATAATCATGTTGATATGTCTTGCTTCATTGATGACAACAATCTTGCTTCTGCTTGGGAGCCTCTATGGACATAA 693 0.443 MQNKMEYKLNSSSSIPIIHVPTKISNSPPPPSSSPPPISQSQSPTSCAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPENQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQTNLVALICMEMSTSNTHQSSSHQEQHHMMMIQPQNNNNNNNHVDMSCFIDDNNLASAWEPLWT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04274 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 59 202 - -
Arst9g04274 230 ProSiteProfiles LOB domain profile. 59 160 IPR004883 -
Arst9g04274 230 MobiDBLite consensus disorder prediction 23 50 - -
Arst9g04274 230 Pfam Lateral organ boundaries (LOB) domain 60 157 IPR004883 -
Arst9g04274 230 Coils Coil 139 166 - -
Arst9g04274 230 MobiDBLite consensus disorder prediction 19 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04274 Arst-Chr9 117711525 117713446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04274 56 230 AS2 family AT1G07900 62.570 4.61e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst9g04274 LOB 2.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04274 - - gmx:100779519 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g04274 9 117711525 117713446 Arst9g04274 9 117711525 117713446 ECH