Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04255 ATGATGATGATGAGTTGTAGTAGTAGCACAACCTTTGATCATGAGGCCTATGAAGCTAAAATCTTTAGGCTTCTACAAATGAGAGATCAAATGCTAAGACAACATCATAGGAATCATGATAATACAAACAAAGGACTTCTTGGGAATAACAACACCAATAATGGCCTCCCTTTGATTCATTTGCTTCTCTCAACCGCCACTGCCGTCGACGGTAACAACTTCGCCGCCGCCTTGAACAACCTCACCGACCTCTACCAGAGCGTTTCCCTAACCGGTGACTCAGTGGAGCGTGTTGTGGCCTACTTCTCTGATGGCTTAACCGCAAGGCTTCTCACAAGAAACTCACCTTTCTATGACATGATCATGGAGGAACCAACTTCTGAGGAAGAGTTTCGTGCTTTCACTGATCTCTATAGAGTCTCTCCCTACTTCCAATTCGCTCATTTCACTGCCAATCAAGCAATCTTGGAGGCCTTCGAGAGGGAGGAAGATCGAAACAACCGTTCCATTCATGTCATCGATTTCGATGTCTCTTACGGCTTCCAGTGGCCTTCTCTGATACAGTCGCTATCAGAAAAGGCCACTAGTACCAGCCGTATTTTCCTAAGAGTAACTGGATTCGGGAAGAATCTGAAGGAGCTGCAAGAAACGGAGTCAAGATTAGTGAGCTTCTCTAAGGGATTTAGCAACCTAGTGTTTGAGTTTCAAGGGCTTCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAATGAAACGGTGGCAGTGAACTTGGTATCATACTTGAACACGTTGAGTTGTTTCACGAAGATCTCAGACACATTGGGGTTTGTGCATTCACTTAGCCCCTCCATTGTTGTGTTGGTTGAGCAAGAAGGTAGCAGGACCCCAACAAGGACATTCTTGTCAAGATTCACCGACTCCTTGCACTACTTTGCAGCCATGTTCGATTCTCTCGACGATTGTCTTCCATTGGAGAGTGCTGAGAGGCTCAGGATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAGAACATGCTCAACAACTATGAAAACAACAACATTGGTGATTGTGCTAAGTATGAGAGGATGGAGGCATGGAAGGCGAGGATGGAGAATCATGGTTTTGTTGGGAATAAGATTAGCTCCAAGGCCATGATTCAAGCCAAGCTACTTTTGAAGATGAGGACTCATTATTGTCCAATGCAGTTTGAAGAAGAAGATGACAGCGACGGCGGCGGCGGCGGCGGCGGTTTCAGGGTTTCGGAGAGAGATGAAGGAAGGGCTGTCTCTTTAGGGTGGCAAAATAGGTTTCTTCTTACTGTCTCAGCTTGGCAACCACTTTCTCTAATCTGA 1356 0.4572 MMMMSCSSSTTFDHEAYEAKIFRLLQMRDQMLRQHHRNHDNTNKGLLGNNNTNNGLPLIHLLLSTATAVDGNNFAAALNNLTDLYQSVSLTGDSVERVVAYFSDGLTARLLTRNSPFYDMIMEEPTSEEEFRAFTDLYRVSPYFQFAHFTANQAILEAFEREEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSTSRIFLRVTGFGKNLKELQETESRLVSFSKGFSNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFTKISDTLGFVHSLSPSIVVLVEQEGSRTPTRTFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKNMLNNYENNNIGDCAKYERMEAWKARMENHGFVGNKISSKAMIQAKLLLKMRTHYCPMQFEEEDDSDGGGGGGGFRVSERDEGRAVSLGWQNRFLLTVSAWQPLSLI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04255 451 Coils Coil 329 349 - -
Arst9g04255 451 ProSiteProfiles GRAS family profile. 49 446 IPR005202 -
Arst9g04255 451 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 441 IPR005202 -
Arst9g04255 451 Pfam GRAS domain family 58 446 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04255 Arst-Chr9 117536888 117538426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04255 66 449 GRAS Transcription Factor Family AT3G54220 34.351 7.75e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst9g04255 GRAS 6.1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04255 - - ahf:112776716 825.854