LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g04209	ATGGCAGCCTCTTCCGCCGGAAATCCGCCGACCTCCTCCCTTTCCTCATCCGCAGCATTATCTCGCGAGAAATTGAATTTCTCGGCGGATTATCCCGCGCGAATCGCACTCTCCTCCGATCAGCTGAAACACTGTACGGAAGCGCTCTCGTTCTTCAAGGAGAAGCTCCACACTCCTCAGAGGATAGCTCAAGAGTTTGCTCGCTTGCAGGCAAATAGGATAACGCCAAGTGAGATGAGGAGAAGATGCACTGTGGCTCTCGATGCTGTCAATTTGAACAAAAATCGATATACTGATGTGTTGCCATTTGACAATAACAGGGTTGTTCTCAAGTCTAGCACGGATTATAGGCCTGAAGCACAGGGATATATCAACGCAAGCTGCATATCTGCCTCTTTGCCCGGAAATGTGTCGCAATTTATAGCCACACAAGGGCCGTTGCCTCACACATATGAGGATTTCTGGGAAATGGTAATCCAATATCATTGCCCTGCAATTGTGATGCTTACTAAGTTGGTCGACAATTACAAGACGATAAAGTGTGGAGATTACTTTCAAGCTGAGGATGGACCTAGAGAATGTGGTAATATCTCTATTATCAGTAAATGGATAAAATCTACTGAAACTTCACTGGTGTTGCGCCATTTGGAAGTAAACCATAAAGAGGCCGAAGATACACCGTTATCAGTTTTGCACATTCAGTATCCTGAATGGCCAGACCATGGAGTTCCAAGAGATACATCTGCTGTTCGTGAGATTTTTAGAAGATTGCACCATTTACCGGCAAACCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGCATTGGTAGAACTGGAACATACTGCACAATTCACAACACAATTCAGAGAATACTTGCTGGTGATATGTCCGCTTTAGATATCTCAAGTACAATAGCTATGTTCAGGTCCCAACGAATTGGAATGGTTCAGACCCAGGATCAGTTTGTTTTCTGCTATGAAGCTATCATAGATGAACTAGAAGACCTTGTTTCTCTACAGCAGTGA	1026	0.4483	MAASSAGNPPTSSLSSSAALSREKLNFSADYPARIALSSDQLKHCTEALSFFKEKLHTPQRIAQEFARLQANRITPSEMRRRCTVALDAVNLNKNRYTDVLPFDNNRVVLKSSTDYRPEAQGYINASCISASLPGNVSQFIATQGPLPHTYEDFWEMVIQYHCPAIVMLTKLVDNYKTIKCGDYFQAEDGPRECGNISIISKWIKSTETSLVLRHLEVNHKEAEDTPLSVLHIQYPEWPDHGVPRDTSAVREIFRRLHHLPANLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSALDISSTIAMFRSQRIGMVQTQDQFVFCYEAIIDELEDLVSLQQ	341

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g04209	341	CDD	PTPc_plant_PTP1	123	327	-	-
	Arst9g04209	341	ProSiteProfiles	PTP type protein phosphatase domain profile.	62	332	IPR000242	GO:0004725\|GO:0006470
	Arst9g04209	341	SMART	ptp_7	229	331	IPR003595	-
	Arst9g04209	341	Pfam	Protein-tyrosine phosphatase	91	330	IPR000242	GO:0004725\|GO:0006470
	Arst9g04209	341	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	251	323	IPR000387	GO:0016311\|GO:0016791
	Arst9g04209	341	PANTHER	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	50	334	-	-
	Arst9g04209	341	Gene3D	Protein tyrosine phosphatase superfamily	35	334	IPR029021	-
	Arst9g04209	341	FunFam	Tyrosine-protein phosphatase non-receptor type 12	39	340	-	-
	Arst9g04209	341	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	46	334	IPR029021	-
	Arst9g04209	341	ProSitePatterns	Tyrosine specific protein phosphatases active site.	269	279	IPR016130	GO:0016311\|GO:0016791

Showing 1 to 10 of 17 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g04209	Arst-Chr9	117157567	117161666	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g04209	40	338	Protein tyrosine phosphatase (PTP) family	AT1G71860	68.896	5.84e-163	457

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g04209	-		-	gmx:548044	551.206

Showing 1 to 1 of 1 entries