Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04208 ATGGCAGCCTCTTCCGCCGGAAATCCGCCGACCTCCTCCCTTTCCTCATCCGCAGCATTATCTCGCGAGAAATTGAATTTCTCGGCGGATTATCCCGCGCGAATCGCACTCTCCTCCGATCAGCTGAAACACTGTACGGAAGCGCTCTCGTTCTTCAAGGAGAAGCTCCACACTCCTCAGAGGATAGCTCAAGAGTTTGCTCGCTTGCAGGCAAATAGGATAACGCCAAGTGAGATGAGGAGAAGATGCACTGTGGCTCTCGATGCTGTCAATTTGAACAAAAATCGATATACTGATGTGTTGCCATTTGACAATAACAGGGTTGTTCTCAAGTCTAGCACGGATTATAGGCCTGAAGCACAGGGATATATCAACGCAAGCTGCATATCTGCCTCTTTGCCCGGAAATGTGTCGCAATTTATAGCCACACAAGGGCCGTTGCCTCACACATATGAGGATTTCTGGGAAATGGTAATCCAATATCATTGCCCTGCAATTGTGATGCTTACTAAGTTGGTCGACAATTACAAGACGATAAAGTGTGGAGATTACTTTCAAGCTGAGGATGGACCTAGAGAATGTGGTAATATCTCTATTATCAGTAAATGGATAAAATCTACTGAAACTTCACTGGTGTTGCGCCATTTGGAAGTAAACCATAAAGAGGCCGAAGATACACCGTTATCAGTTTTGCACATTCAGTATCCTGAATGGCCAGACCATGGAGTTCCAAGAGATACATCTGCTGTTCGTGAGATTTTTAGAAGATTGCACCATTTACCGGCAAACCTTGGCCCAATAGTGGTGCACTGCAGGCATTGGTAG 825 0.4594 MAASSAGNPPTSSLSSSAALSREKLNFSADYPARIALSSDQLKHCTEALSFFKEKLHTPQRIAQEFARLQANRITPSEMRRRCTVALDAVNLNKNRYTDVLPFDNNRVVLKSSTDYRPEAQGYINASCISASLPGNVSQFIATQGPLPHTYEDFWEMVIQYHCPAIVMLTKLVDNYKTIKCGDYFQAEDGPRECGNISIISKWIKSTETSLVLRHLEVNHKEAEDTPLSVLHIQYPEWPDHGVPRDTSAVREIFRRLHHLPANLGPIVVHCRHW 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04208 274 ProSiteProfiles PTP type protein phosphatase domain profile. 62 274 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 PRINTS Protein tyrosine phosphatase signature 140 160 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 PRINTS Protein tyrosine phosphatase signature 228 245 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 PRINTS Protein tyrosine phosphatase signature 266 274 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 PRINTS Protein tyrosine phosphatase signature 122 129 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 272 IPR029021 -
Arst9g04208 274 SMART PTPc_3 61 273 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 Pfam Protein-tyrosine phosphatase 91 272 IPR000242 GO:0004725|GO:0006470
Arst9g04208 274 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 50 271 - -
Arst9g04208 274 Gene3D Protein tyrosine phosphatase superfamily 35 273 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04208 Arst-Chr9 117157565 117159765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04208 40 271 Protein tyrosine phosphatase (PTP) family AT1G71860 65.948 2.33e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04208 - - gmx:548044 426.787