Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04189 ATGGGTGCTGAAGCTGGTGCAACTGAGTGTTTCAGTAAGGCCATGGCGTCGATGCCTGGGTTTCGGTTCCATCCCACGGATGAGGAGCTGGTTATGTACTATCTGAAGAGGAAGATATGTGGGAAGAAGCTGAAACTCGACGTGATTCTAGAAACCGATGTTTACAAGTGGGATCCTGAGGAATTGCCAGAGATATCTGTACTGAGGACTGGAGATAGGCAATGGTTCTTTTTCACTCATAGAGATAGGAAGTATCCTAATGGTGCGAGGTCCAACCGAGCAACAAGGCAAGGTTACTGGAAAGCAACAGGAAAGGATCGTAATGTGACCTGCAATTCTCGGTCAGTTGGAGTGAAAAAGACTCTGGTTTTCTATAGAGGCAGAGCTCCTAATGGTGAGCGGACCGATTGGGTTATGCATGAATACACCATGGATGAAGAAGAGCTGAATAGGTGCCAAGATATTAAGGACTATTTTGCACTTTACAAGCTATACAAGAAAAGTGGACCTGGTCCTAAAAATGGAGAACAGTATGGTGCACCATTTAAAGAAGAGGAGTGGGCTGATGACGAATGTGTAGATTTCAATATTAACTCAGCAGATCGGGAGGAAGTAAATACTGTCCCTGTTAATGATCAGCTGCCTCCTTTGGCCGATGATGAAGTCACGGATATGATTAATCAAATTTTGGATAATGAGCTTGCCCTTGACCAGCAATTTGGTGACGGCCTTGAATTTCCTCAGGTTGTTGCTGAAGAAACACAAAGTACTGTGGTGGATCAGTTCTCTGAGGCAGTGACGGACCCCGAGTACAACGATATTTACCACTCAACCAGTCAGCACTATGATGTGCAGAATGTCAACTTCAATCAGTCGGTTGCATCTCACCTTCATGCCCCGGAAGGATCAGAAGTTATTTCTACTGCCAACATTCAAGTAGAAGACTATAACTTTCAGGAGGATGACTTCTTGGAAATCAACGATCTCAATGGTAGTGAACTTACAATTCCAAATATGGAAACACCAGTGGAGAACCTGCAGTTTGAAGATGGATTGTGTGAACTTGATCTGTTCCAAGATGCAGAGATGTTTCTTCGTGACTTGGGACCAATCAATGAGGAAACCATTCCACATTCATATATGAATAATGCCGCTGGAAGCAACATTGAAAATCAGAATTATCACTTGCTGCCCAATCCAGAGGACGCTACTCAAAATGTTCATGAATTTTGGATGCATGATGAAAGAAACACCTCGAGTCTGTTTGAAGGCTTTGATGATTCTCTCTCTCAACAAAATCCAGGTGCTGTATCTACTGAAGGCTATGATAATCAAAGTAGCATTGCAGAAGATGTTGCTACAAGTAGATTCTCTTCGGCTCTCTGGTCCTTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCGGAAAATGCTCTAGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCCGAGTGAAGATTAATATCAAGCCGACGAACACAGCTGCAGGTAAAGACACTGCAACTACGAAGAGAGTGGGCAGAAAAGGATTTTCATTCCTTTTCTTCCCAATTATTATTGCTTTATGTGCTTTCTTATGGGTTTCTCTTGGAACTTTTAGATTATTAGGGAGATGCATCGCTCCTTGA 1656 0.4324 MGAEAGATECFSKAMASMPGFRFHPTDEELVMYYLKRKICGKKLKLDVILETDVYKWDPEELPEISVLRTGDRQWFFFTHRDRKYPNGARSNRATRQGYWKATGKDRNVTCNSRSVGVKKTLVFYRGRAPNGERTDWVMHEYTMDEEELNRCQDIKDYFALYKLYKKSGPGPKNGEQYGAPFKEEEWADDECVDFNINSADREEVNTVPVNDQLPPLADDEVTDMINQILDNELALDQQFGDGLEFPQVVAEETQSTVVDQFSEAVTDPEYNDIYHSTSQHYDVQNVNFNQSVASHLHAPEGSEVISTANIQVEDYNFQEDDFLEINDLNGSELTIPNMETPVENLQFEDGLCELDLFQDAEMFLRDLGPINEETIPHSYMNNAAGSNIENQNYHLLPNPEDATQNVHEFWMHDERNTSSLFEGFDDSLSQQNPGAVSTEGYDNQSSIAEDVATSRFSSALWSFVESIPTTPASAAENALVNRALNRMSSFSRVKINIKPTNTAAGKDTATTKRVGRKGFSFLFFPIIIALCAFLWVSLGTFRLLGRCIAP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04189 551 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Arst9g04189 551 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 267 - -
Arst9g04189 551 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Arst9g04189 551 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
Arst9g04189 551 FunFam Nac domain-containing protein 86 26 170 - -
Arst9g04189 551 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04189 Arst-Chr9 116945934 116949990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04189 3 549 NAC Transcription Factor Family AT1G34190 41.176 3.65e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst9g04189 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04189 - - gmx:100794925 785.023