Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04165 ATGGAACATACTGTTCCAAACAGTGTTACAACTTTGCTGCTATTCTTCTTGTGTCTCACAGTAACAAAGATGGAAATGAGTACTTGTCTCTCACCTGATGGACAAGCACTTCTTTCTCTTGTTTCTGCATCTGAAAGATCATCATCAGCATCTTCCTCACTTCTCTCTTCATGGAACCCTTCAAGCTCAACACCATGTTCATGGAAGGGTGTTACATGCTCCCCACAAAGCAGAGTAATTTCCCTTTCTATCCCTGACACTTTCCTCAACCTTACCTATTTGCCTCCCCAGCTTTCTTCTTTGTCAATGCTGCAACTTCTCAACCTCTCTTCCACCAATGTGTCTGGCCAAATCCCTCCCTCTTTTGGTCAACTCTCCCATCTCCAACTCCTTGACCTCTCATCAAACTCTCTAACAGGTTCCATTCCTAATGAACTTGGAAACCTCTCTTCACTTCAGTTCCTTTTCTTGAACTCAAACAAACTCACAGGAACCATTCCTCAGCATCTTGCTGACCTTACCTCACTCCAAGTTCTGTGCCTGCAAGACAATCTCCTTAACGGTTCAATACCATCACAGTTAGGATCATTGAAATCTCTACAGCAGTTTAGGATTGGTGGAAATCCATACCTCACTGGAGAGATTCCATCACAGTTAGGACTACTCACAAACCTCACCATATTTGGTGCAGCTGCCACTGGACTTTCTGGTTCCATTCCCTCTTCATTTGGGAACTTGATCAATCTTCAAACTCTAGCACTTTATGACACTGATGTTTCCGGTTCAATACCGCCGGAACTCGGGCTCTGTTCCGAGTTGAGAAATCTTTATTTGCACATGAACAAGCTCACTGGTTCTATTCCTCCTCAGTTGGGGAAGCTGCAAAAGCTCACAAGTTTGCTTCTTTGGGGGAATGCATTATCTGGGTCAATACCAGCTGAGATTTCTAACTGTTCATCACTTGTGGTGTTTGATGCCTCTTCCAATGAACTCACTGGTGAAATACCTGAGGATTTTGGGAAGCTTGTGGTTATGGAACAGCTTCATTTATCAGATAATTCCCTCTCAGGGAAAATACCATGGCAGTTGGGAAACTGCACAAGCCTTGCTACTGTTCAGCTTGACAAGAATCAGTTATCAGGTTCAATCCCTTGGCAAGTTGGGAAGTTGAAATTCTTGCAGAGTTTTTTCTTGTGGGGTAACTCAGTTTCTGGAACCATACCACCCTCTTTTGGGAACTGCACAGAACTCTTTTCGCTTGACCTTTCAAGGAACAAGCTCACAGGTTCAATCCCGGAAGAGATTTTCAGCTTGAAGAAGCTGAGTAAACTTTTGCTTCTTGGAAATTCTTTGACAGGAGAGTTGCCATCAAGTGTTGCAGATTGTGAATCTTTGGTGAGACTACGGCTCGGAGAAAACCAGCTTTTAGGGAACATTCCTAAAGAAATAGGCCAATTACAGAACCTGGTGTTTCTTGACTTGTACATGAATCATTTCTCTGGAAGCTTACCAGTAGAGATTGCCAACATAACAGTTCTTGAGCTCTTAGACGTGCATAACAACCACATAACCGGCGAAATTCCGTCTCAGATTGGGGAGCTTGCAAACTTGGAGCAGCTTGATCTAAGTCGAAACCATTTGACAGGTGGAATTCCTTGGAGCTTTGGAAACTTCAGTTATTTGAACAAGCTCATCCTCAACAATAATTTACTCACAGGATCAATCCCAAAATCTATTAGGAATTTGCAGAAGCTAACTCTTCTTGATTTGAGTTACAACAATCTCTCTGGTGACATACCTTCTGAGATTGGTTATGTTACAAGCTTAACCATTAGTTTGGACTTAAACTCGAATTCATTCACAGGAGAAATCCCAGAGTCAATGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTCATAATATGTTTTATGGAGGAATTAAGGTTCTTGGTTCTCTCACCAGTCTCACTTCCCTCAATATCTCGTACAACAATTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACTCTTTCTTTTAACTCATGCCTTCAGAACCCCCTTCTATGCCAGTCCATTGATGGCAATACGTGTTCTTCAAGCCTGATTCAAAGAAATGGTATAAAATCTGCGAAAACCATAGCTTTCGTAACTGTGATTCTAGCTTCAATTGTGATAATTGCTGTTGCATCCTGGATTATAGCAACTCGTAGTAACAGGTATACAGTGGAAAAATCTTTGGGGGCATTGGCGTCCACATCAGGAGCTGAGGATTTCTCATATCCTTGGACCTTTATCCCATTTCAAAAGCTAAACTTCACCATAGATAACATCTTGGATTGCTTGAAGGATGAAAATGTGATCGGGAAGGGTTGCTCCGGTGTTGTCTACAAGTCTGAGATGCCTAATGGGGAGTTGATAGCAGTGAAAAAGCTATGGAAAGCTAGCAAAGAAGATGAAACACTGGACTCTTTCGCTGTAGAGATTCAGATTCTCGGATACATCCGGCACAGAAACATTGTGAGGCTACTGGGCTATTGTTCTAACAGGAGTGTCAAGCTTCTTCTCTACAATTTCATCCCAAATGGTAATCTGAGACAGCTCTTGCAAGGGAACAGGAACTTAGACTGGGAAACCAGATACAAGATTGCTGTTGGAACAGCTCAGGGTCTTGCTTACCTTCATCATGATTGTGTCCCTCCCATTCTTCACAGAGATGTCAAGTGCAATAACATACTTCTAGATTCCAAATACGAAGCATATCTCGCAGATTTTGGTCTTGCAAAGCTGATGAATTCACCAAGTTATCATCAGGCAATGTCTAGAGTTGCTGGTTCTTATGAGTATGGCTACTCAATGAACATAACTGAGAAGAGTGACGTCTACAGTTACGGAGTGGTTCTGCTGGAGATACTAAGCGGGCGCAGTGCCGTCGAATCCCATGTCGGAGATGGACAACACATAGTTGAGTGGGTGAAGAGGAAAATGGGGAGCTTTGAACCAGCTGTGTCAATACTAGACACAAAACTCCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTCCAAACACTTGGAATTGCCATGTTTTGCGTGAACTCTTCGCCATCAGAACGTCCCACGATGAAGGAAGTGGTTGCATTGCTAATGGAGGTGAAGAGCCAGCCTGAAGAGATGGGCAAAACCTCTCAACCTCTAATAAAGCACCCTTCAAATCAAAGCTAA 3231 0.4284 MEHTVPNSVTTLLLFFLCLTVTKMEMSTCLSPDGQALLSLVSASERSSSASSSLLSSWNPSSSTPCSWKGVTCSPQSRVISLSIPDTFLNLTYLPPQLSSLSMLQLLNLSSTNVSGQIPPSFGQLSHLQLLDLSSNSLTGSIPNELGNLSSLQFLFLNSNKLTGTIPQHLADLTSLQVLCLQDNLLNGSIPSQLGSLKSLQQFRIGGNPYLTGEIPSQLGLLTNLTIFGAAATGLSGSIPSSFGNLINLQTLALYDTDVSGSIPPELGLCSELRNLYLHMNKLTGSIPPQLGKLQKLTSLLLWGNALSGSIPAEISNCSSLVVFDASSNELTGEIPEDFGKLVVMEQLHLSDNSLSGKIPWQLGNCTSLATVQLDKNQLSGSIPWQVGKLKFLQSFFLWGNSVSGTIPPSFGNCTELFSLDLSRNKLTGSIPEEIFSLKKLSKLLLLGNSLTGELPSSVADCESLVRLRLGENQLLGNIPKEIGQLQNLVFLDLYMNHFSGSLPVEIANITVLELLDVHNNHITGEIPSQIGELANLEQLDLSRNHLTGGIPWSFGNFSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLSYNNLSGDIPSEIGYVTSLTISLDLNSNSFTGEIPESMSALTQLQSLDLSHNMFYGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSFNSCLQNPLLCQSIDGNTCSSSLIQRNGIKSAKTIAFVTVILASIVIIAVASWIIATRSNRYTVEKSLGALASTSGAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKSEMPNGELIAVKKLWKASKEDETLDSFAVEIQILGYIRHRNIVRLLGYCSNRSVKLLLYNFIPNGNLRQLLQGNRNLDWETRYKIAVGTAQGLAYLHHDCVPPILHRDVKCNNILLDSKYEAYLADFGLAKLMNSPSYHQAMSRVAGSYEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPSERPTMKEVVALLMEVKSQPEEMGKTSQPLIKHPSNQS 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04165 1076 Pfam Leucine rich repeat 393 451 IPR001611 GO:0005515
Arst9g04165 1076 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515
Arst9g04165 1076 Pfam Leucine rich repeat 536 595 IPR001611 GO:0005515
Arst9g04165 1076 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 346 1051 - -
Arst9g04165 1076 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 346 1051 - -
Arst9g04165 1076 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 30 193 - -
Arst9g04165 1076 FunFam Putative LRR receptor-like serine/threonine-protein kinase 769 861 - -
Arst9g04165 1076 SMART serkin_6 784 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g04165 1076 MobiDBLite consensus disorder prediction 1057 1076 - -
Arst9g04165 1076 ProSitePatterns Protein kinases ATP-binding region signature. 790 813 IPR017441 GO:0005524
Arst9g04165 1076 FunFam Putative LRR receptor-like serine/threonine-protein kinase 613 696 - -
Arst9g04165 1076 SUPERFAMILY Protein kinase-like (PK-like) 767 1051 IPR011009 -
Arst9g04165 1076 Gene3D Transferase(Phosphotransferase) domain 1 862 1070 - -
Arst9g04165 1076 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
Arst9g04165 1076 Gene3D Ribonuclease Inhibitor 286 385 IPR032675 -
Arst9g04165 1076 PRINTS Leucine-rich repeat signature 128 141 - -
Arst9g04165 1076 PRINTS Leucine-rich repeat signature 534 547 - -
Arst9g04165 1076 Gene3D Ribonuclease Inhibitor 480 575 IPR032675 -
Arst9g04165 1076 Gene3D Phosphorylase Kinase; domain 1 769 861 - -
Arst9g04165 1076 SUPERFAMILY L domain-like 372 702 - -
Arst9g04165 1076 SMART LRR_typ_2 173 197 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 294 318 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 149 172 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 631 658 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 486 509 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 125 148 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 534 557 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 582 606 IPR003591 -
Arst9g04165 1076 SMART LRR_typ_2 414 438 IPR003591 -
Arst9g04165 1076 Pfam Protein kinase domain 786 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g04165 1076 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Arst9g04165 1076 SUPERFAMILY RNI-like 107 464 - -
Arst9g04165 1076 FunFam Piriformospora indica-insensitive protein 2 432 526 - -
Arst9g04165 1076 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 209 431 - -
Arst9g04165 1076 ProSiteProfiles Protein kinase domain profile. 784 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g04165 1076 MobiDBLite consensus disorder prediction 1059 1076 - -
Arst9g04165 1076 FunFam Leucine-rich repeat receptor protein kinase EMS1 527 612 - -
Arst9g04165 1076 Gene3D Ribonuclease Inhibitor 191 285 IPR032675 -
Arst9g04165 1076 Gene3D Ribonuclease Inhibitor 576 702 IPR032675 -
Arst9g04165 1076 Gene3D Ribonuclease Inhibitor 386 479 IPR032675 -
Arst9g04165 1076 Gene3D Ribonuclease Inhibitor 32 190 IPR032675 -
Arst9g04165 1076 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 862 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04165 Arst-Chr9 116810227 116814300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04165 29 1070 Receptor kinase-like Gene Family AT5G56040 44.256 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst9g04165 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04165 - - gmx:100819611 1746.1