Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04159 ATGCCGGAATCGGAGACCGGGACGCCAACAGCGGCGTCTATGCCGGCGACGCCGGATACTCCGGGAGGGCCGCTGTTCACGTCGCTTCGAGTGGACTCGCTGACACACGAACCGTCGTTTACAATGGCGGGAAGGTGCGGCACGTGTTTGCCAGCTGCCATGAGTAAGAGCCATAGTTGCATCGCTGATTTCACTGTTGGTGTTCCAATGCCAAATGTGTCTCTCGCTCAAAAGGTTGGAGCAGAGTTTGTTGGAACATTCATACTGATATTTGCAGCAACAGCAGGGCCCATTGTGAACAACAAGTACAACGGAGCAGAGACTCTAATGGGCAACGCAGCATGCGCCGGCCTCACCGTCATGTTCATAATCCTCTCCATTGGCCACATCTCCGGCGCCCACCTAAATCCATCCCTCACCATCGCCTTCGCCGCGTTTCGCCACTTCCCATGGACTCATGTCCCTGCCTACATTGCCGCACAAGTCTCTGCCTCCATTTGCGCCTGCTTTGCTCTCAAGGGCGTTTACCACCCTTACCTCTCCGGCGGCGTCACCGTGCCTTCTAACATCACTGTTGGCCAGGCCTTTGCCACTGAATTCATCATCACTTTCATTCTCATGTTTGTTGTAACTGCCGTTGCCACTGATACTCGTGCTGTTGGAGAGTTGGCTGGTATAGCTGTTGGTGCCACTGTTTTGCTCAACATTCTCATTTCAGGGCCAACAAGCGGCGGTTCCATGAATCCGGTTCGAACGTTGGGTCCAGCGGTAGCGGCAGGGAATTACAAACACATATGGCTGTACTTGGTGGCGCCAACACTGGGTGCCCTTGCAGGCGCCGGCGTTTATACGCTGGTTAAGCTGCAGGAAAGCGATGCTCAGCCGCCGCGACAGACTAGGAGCTTCCGTGACAGGGCAGGCTAG 924 0.5541 MPESETGTPTAASMPATPDTPGGPLFTSLRVDSLTHEPSFTMAGRCGTCLPAAMSKSHSCIADFTVGVPMPNVSLAQKVGAEFVGTFILIFAATAGPIVNNKYNGAETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACFALKGVYHPYLSGGVTVPSNITVGQAFATEFIITFILMFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWLYLVAPTLGALAGAGVYTLVKLQESDAQPPRQTRSFRDRAG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04159 307 ProSitePatterns MIP family signature. 134 142 IPR022357 -
Arst9g04159 307 Gene3D Glycerol uptake facilitator protein. 69 300 IPR023271 -
Arst9g04159 307 PRINTS Major intrinsic protein family signature 153 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 PRINTS Major intrinsic protein family signature 116 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 MobiDBLite consensus disorder prediction 1 15 - -
Arst9g04159 307 Pfam Major intrinsic protein 73 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 CDD MIP 77 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g04159 307 FunFam Aquaporin NIP2-1 65 298 - -
Arst9g04159 307 MobiDBLite consensus disorder prediction 1 23 - -
Arst9g04159 307 PANTHER AQUAPORIN NIP2-1 61 291 IPR034294 -
Arst9g04159 307 SUPERFAMILY Aquaporin-like 74 294 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04159 Arst-Chr9 116712263 116722620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04159 25 303 Major Intrinsic Protein MIP AT4G10380 72.340 1.01e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04159 K09874 - gmx:100775229 522.316