Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04142 ATGGAAAAGGCACTCCAAGCCGTCTTGGCCGCCGCCGGCACCTTCTTTGTCCACGACAACCGCGCTACCAACCCAACCCGAACCCGAACCCGACCCCTCCCAAACACTGACCAATCGTCCGTCTCCGTCGTAGATGCCAGCTGGTCCTCCGATCCCAACCTCAAGATCTCCCTTACCGAGCTCGCACGCGCCACTGAAAACTTCTCTCCAAATCTCATCGTCGGCGACGGCAGCTTTGGCCTCGTCTATAAGGCCCGCCTCAACGACGGCACCGTCGTCGCCGTCAAGAAGCTCTCCCCGGACGCTTTCCAAGGCTTCCGCGAGTTCCAGGCCGAGATGGAAACTCTAAGCAAGCTCGATCACCCAAACATCGTCAAGATCCTCGGCTACTGGTCCTCCGGGCCCGAACGCTTACTCGTCTACGAGTTCATCGAACGGGGAAACCTCGATCAGTGGCTCCACGAGCCCACCACTGGGCCCAACGACCACATCTCCCTCAGCGACCTCCGTTTACCTCTGTCATGGGAAACCAGGGTCAACATCATTAGAGGCGTGGCCCGCGGGCTTTACTATCTCCACGGGCTTGATAAGCCCATCATACACAGGGACATCAAAGCCAGTAACGTGTTATTGGACTCCGAGTTCAAGGCCCATATAGCTGATTTCGGGCTTGCTCGGAGGATTGACACGTCCAAATATTCACACGTGTCAACGCAGTTTGCTGGGACCATGGGCTACATGCCCCCGGAGTATGTTGCTGGGGCCAATGTGGCCAACCAGAAGGTGGATGTGTATAGCTTTGGGATTTTGATGCTTGAGACGGGCTCAGGGCGCAGGACTAATTTGCCAGTGAAGTTAGGGGAGGAAGATATTGGGCTGGTCCAGTGGGCCCGGAAGATGAAGGAGCGAAATGCTGAGATGAATATTGTTGATGTGAATATTTCAAGGGAAGGTTTAAGGGAAGAGTGTGTTAAAGAGTATGTGAGGATTGCTTGCATGTGCACTGCTGAGTTGCAGAAGGAAAGGCCTGAGATGCCTGAGGTTGTTCGCTTGTTGGATTCCATGCCGCTCTGA 1074 0.5503 MEKALQAVLAAAGTFFVHDNRATNPTRTRTRPLPNTDQSSVSVVDASWSSDPNLKISLTELARATENFSPNLIVGDGSFGLVYKARLNDGTVVAVKKLSPDAFQGFREFQAEMETLSKLDHPNIVKILGYWSSGPERLLVYEFIERGNLDQWLHEPTTGPNDHISLSDLRLPLSWETRVNIIRGVARGLYYLHGLDKPIIHRDIKASNVLLDSEFKAHIADFGLARRIDTSKYSHVSTQFAGTMGYMPPEYVAGANVANQKVDVYSFGILMLETGSGRRTNLPVKLGEEDIGLVQWARKMKERNAEMNIVDVNISREGLREECVKEYVRIACMCTAELQKERPEMPEVVRLLDSMPL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04142 357 FunFam Phytosulfokine receptor 2 144 356 - -
Arst9g04142 357 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 354 - -
Arst9g04142 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Arst9g04142 357 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Arst9g04142 357 SMART serkin_6 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g04142 357 PIRSF ILK 49 357 - -
Arst9g04142 357 Pfam Protein tyrosine and serine/threonine kinase 74 352 IPR001245 GO:0004672|GO:0006468
Arst9g04142 357 Gene3D Transferase(Phosphotransferase) domain 1 144 356 - -
Arst9g04142 357 ProSiteProfiles Protein kinase domain profile. 68 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g04142 357 Gene3D Phosphorylase Kinase; domain 1 32 143 - -
Arst9g04142 357 SUPERFAMILY Protein kinase-like (PK-like) 39 351 IPR011009 -
Arst9g04142 357 CDD STKc_IRAK 74 355 - -
Arst9g04142 357 FunFam Phytosulfokine receptor 2 29 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04142 Arst-Chr9 116576366 116578130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04142 44 352 Receptor kinase-like Gene Family AT5G07280 43.871 7.24e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Arst9g04142 PK_Tyr_Ser-Thr 3.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04142 - - gmx:100802728 503.442