Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04141 ATGGATCCTAATGTAGAAGAAGAGTTGCCCCAATACATACATATAAATCAGAATGAATTTTTTATACGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGATTGCAAATATAATGTTGACGACCCTGATAGTGCATGTGGGGACGGCTGCCTCAATGTTTTAACCAGCACCGAATGCACTCCTGGATATTGCCCATGTGGTGACCTCTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGTTGGGGTCTTTTGGCTGATGAGAACATTAAGGCGGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAATTCAAGGTCTAACAGATGCATTTATCATTTGCCTTAATGCCTTTGAATCTATTGATGCAACAAGAAAGGGAAGTCTTGGCAGATTTATAAATCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGCGAAATAAGAGTTGGAATATTTGCGAAATATGATATTCCTTTTGGAGCTGAATTGGCATATGACTATAATTTTGAATGGTTTGGGGGCACAAAGGTTCGCTGCCTCTGCGGTGCAGCTAGATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTCCAAGAAGATACTTATCTATGGGAAGATGATGATGACAGGTACTCTGTTGAGAAAATTCCTGTATATGACTCCGCGGAGGATGAATTGGGGACAGAAGTTCTTAAACGTATGAACTCAGACAGCTCTGGAAATGATTTTAATGGAAGAATAGGATCCTCCGTGGATAATACACTGAAAGCTGAGCAGCTACCAGAGTCCGGTGCTTTCAGTATTCCCCTTAATTTGGCTCAGATGAAGGATTTAGATGTCAAGAAGATTAAAACTGAAGTAGTAAGCGAGGATATGAAATTGGATTCTGAAGATACTGAACAGGCCTTCTCCCAAAAGAATGCAATGATCTCGCGTATCCGAAGTAATAGTGCTGCCAGAAACTATCACCTTGGACCTGGGTCCATGTCTACTAAACGATCCAAGGCATATCGTGGCAGAAAGTTAAAGAATCTTGTTCAGAAGAAAGTTGATGCCAAGTTTGCCGCTGGACTCTTGGCTTCAAAGGAAGCACAAGAGGAGATTCTAAAATATGAGGAAGTCAAGAATAATGCTACTTCTGGTCTCGATTCCTTGTACGATGAAATAAGGCCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCTACCTCTGTAGCAGAGAAGTGGATTCAAGCTTGCTGCCTAAAATTGAAGGCAGAGTTTGATCTTTACTCCTCAATTGTCAAAAACGTGGCTTGCACTGCTCAAAGGTCTAAACCTCCCCCAGAAGCTGATAATGAAAACGAAATTAGGCTGTTGATGGGTTGA 1476 0.4112 MDPNVEEELPQYIHINQNEFFIRRHKKQKEEDIAICDCKYNVDDPDSACGDGCLNVLTSTECTPGYCPCGDLCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFVIEYCGEVISWKEAKRRSQAYEIQGLTDAFIICLNAFESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKYDIPFGAELAYDYNFEWFGGTKVRCLCGAARCSGFLGAKSRGFQEDTYLWEDDDDRYSVEKIPVYDSAEDELGTEVLKRMNSDSSGNDFNGRIGSSVDNTLKAEQLPESGAFSIPLNLAQMKDLDVKKIKTEVVSEDMKLDSEDTEQAFSQKNAMISRIRSNSAARNYHLGPGSMSTKRSKAYRGRKLKNLVQKKVDAKFAAGLLASKEAQEEILKYEEVKNNATSGLDSLYDEIRPAIEEHERDSQDSVSTSVAEKWIQACCLKLKAEFDLYSSIVKNVACTAQRSKPPPEADNENEIRLLMG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04141 491 SMART PostSET_3 208 224 IPR003616 -
Arst9g04141 491 SMART shorttest3 31 83 IPR006560 GO:0005634|GO:0042054
Arst9g04141 491 Pfam AWS domain 43 81 IPR006560 GO:0005634|GO:0042054
Arst9g04141 491 ProSiteProfiles AWS domain profile. 31 82 IPR006560 GO:0005634|GO:0042054
Arst9g04141 491 ProSiteProfiles Post-SET domain profile. 208 224 IPR003616 -
Arst9g04141 491 Pfam SET domain 95 201 IPR001214 GO:0005515
Arst9g04141 491 MobiDBLite consensus disorder prediction 472 491 - -
Arst9g04141 491 Gene3D SET domain 2 236 IPR046341 -
Arst9g04141 491 ProSiteProfiles SET domain profile. 84 201 IPR001214 GO:0005515
Arst9g04141 491 SUPERFAMILY SET domain 9 221 IPR046341 -
Arst9g04141 491 SMART set_7 84 207 IPR001214 GO:0005515
Arst9g04141 491 PANTHER SET DOMAIN PROTEINS 8 475 - -
Arst9g04141 491 FunFam Histone-lysine N-methyltransferase 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04141 Arst-Chr9 116571473 116575989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04141 66 223 C2H2 Transcription Factor Family AT2G23740 34.807 1.44e-20 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst9g04141 SET 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04141 - - lang:109335575 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g04141 9 116571473 116575989 Arst9g04141 9 116571473 116575989 ECH