Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04087 ATGGCATTGACTCCACCACCTCATACAACAACAGAAGAGGAACAACGACACAATAACAATAATAGGTGCCACATGAACCTCGCTATCTCCCCTAACTGCACCGGGGAGCCACAAGCAAATTTGAGTGCTGTCATTAATCACTATCTCCACACTCTAAATCACTTCAACTTGCGCAACTTGGGGTACCCCACGAATCAGAATTTCAACTACGATGCATTGGCACCATTGCTACAATTTCACCTAAACAATGCAGGTGATCCATTTGTTGGGAGCAGCTTCCGTCTAAATTCAACATCATTTGAAGTTAGTGTTCTTGATTGGTTCGCTAATTTGTGGGACATACAAAAGAATAAGTATTGGGGATACGTCACTACTGGTGGAACTGAGGCCAATCTTCACGCCATTTTAGTAGGGAGAGAACAATTTCCTGATGGGGTTCTATATACTTCAGAAGATTCACATTATTCAATATTTAAAATAGCAAGACTATGTCGAATGCAATGTGTCAAAGTTAGAACTCTTATCTCCGGTGAGATTGACTGTGCTGATCTAAAAGCTTCACTACTTCATCACAAGGACAGGCCAGCCATCATCAATCTTAACATAGGTACAACAATGAAAGGAGCTATTGATGACATTGATCTTATAATAAAAACACTTGAAGAAAGTGGTTTCAGTCGTGATAGATTCTACATTCATTGTGATGCAGCTCTATTTGGAATCATGCTCCCTTTTCTCAAAACAGCATCAAAGATAATAAGTTTCAAGAAAGCCATTGGAAGTGTGAGTGTTTCAGGGCATAAATTTTTGGGATGTCCAATTCCCTGTGGGGTTGTAATAACGCGTTCAGAATACATGAATTCGTCATCAAGGGATGTTGAAATCATTGGTTCAAGGGATGCAACAATCACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCTATAAAAAAGAAAGGTTCAATAGGGATTCAAAACGAAGTGGAAAATTGCATAGCGAATGCACGTTACTTGCATAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGCATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATCAATTTAGCCGTAGGTGGAACTTGGCATGCCAAGAGAACATTGCACACGTGGTGGTCATGCAACATATTACCATTCAAATGTTGGATTCTTTTGTTACTGAGTTTCTTCATAAACGATCATTTTCTTATGGCTCTTTTCAGCCTTTATGCATCGCAGAAAAAGTTGGCGCTGCAAATTGTTCTTGCTCAATGCACAATTTGATATCTTGA 1317 0.3971 MALTPPPHTTTEEEQRHNNNNRCHMNLAISPNCTGEPQANLSAVINHYLHTLNHFNLRNLGYPTNQNFNYDALAPLLQFHLNNAGDPFVGSSFRLNSTSFEVSVLDWFANLWDIQKNKYWGYVTTGGTEANLHAILVGREQFPDGVLYTSEDSHYSIFKIARLCRMQCVKVRTLISGEIDCADLKASLLHHKDRPAIINLNIGTTMKGAIDDIDLIIKTLEESGFSRDRFYIHCDAALFGIMLPFLKTASKIISFKKAIGSVSVSGHKFLGCPIPCGVVITRSEYMNSSSRDVEIIGSRDATITGSRCGHAPIFLWYAIKKKGSIGIQNEVENCIANARYLHNRLSDAGIGAMLNEHSNIVVFERPLDHQFSRRWNLACQENIAHVVVMQHITIQMLDSFVTEFLHKRSFSYGSFQPLCIAEKVGAANCSCSMHNLIS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04087 438 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 261 282 IPR021115 GO:0016831
Arst9g04087 438 Gene3D Aspartate Aminotransferase, domain 1 320 408 IPR015422 GO:0003824
Arst9g04087 438 PANTHER - 14 435 - -
Arst9g04087 438 SUPERFAMILY PLP-dependent transferases 52 404 IPR015424 -
Arst9g04087 438 Gene3D - 76 319 IPR015421 GO:0003824
Arst9g04087 438 Pfam Pyridoxal-dependent decarboxylase conserved domain 97 356 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04087 Arst-Chr9 116054891 116057112 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04087 202 371 Calmodulin-binding Proteins AT1G65960 26.257 6.58e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04087 K25193 - gmx:100781665 645.195