Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04080 ATGGAGAGTTTCTGGAGGATGTTTTGTGGGGAATCTGGTTGTTCAGGAAATCCTTATTGCAGTTATGATTTCAAGTTTTTGAAGGATCCTTCCTCATGTATCAACCATTTTCTGATCTTATGCATTCATGTGTTGCTTGTCATCATGATCTCATCAATCACCATGTTTCACAAGCCCTCTCCACTGAAAAAACAACATCATCATGGACAAAGCTATTCAAGATTGCAGCTAGTTTCTGCCATAGCCAATGGCTCTTTGGGCTTGGTACATTTGATCTCAGGATTCTGGTTCCTAGACGAGAATCTGAGAAAAACCAGAACTGTTTTCCCTCTTGATTGGTGGTTTCTTGAATTCATTCAAGGGTTGTCATGGTTGTTTGTAGGATTAACAATGAGTCTTAGGGTGAAACAACTTCCAAGAACATGGTTAAGGCTCATTTCTGTTCTTATTTTCTTGATTTCTGGAATTCTTTGTGCTTTGTCCTTGTTCTATGCAGTTAGTAGCAGAGGAATTTCCCTGAAAGTTGTTTTAGATGTTCTATCTTTTGGCGGCGCAATTTCATTGCTACTATGCAGTTACAAGGAATCTAAGCATAGAGACTTTGAAGGAGAAGAAAATTATGAAAGCCTTTACATGCCTTTAAATGATGAATCCATGTCCAACTCAATTGATTCTGATTCTGTTAGCTCTGTCACACTATTTTCCGGAGCCGGAATCTTCAGTTGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAAGAGGAAAACAGAAAACACTTCAGGAACAAGACATTCCCAAGCTTCGTGAGGCCGACCGAGCTGAAAGCTGTTACTTTCAGTTCCAAGAACAATTGAACAAGCAGAAGATGAAAGAACAATCAGCACAGCAGCCATCACTCTTGAAAACAATAATTATGTGCCATTGGAAAGAGATTCTGATCTCAGGATTCTTTGCATTGCTGAAGGTGATAACTCTCTCTTGTGGACCTCTGCTTCTAAATTCCTTTATACTTGTTGCTGAGGGTAATGAGAGTTTCAAACATGAAGGTTATGTATTGGCCATATCATTGGTCATTACAAAGATCATTGAATCTTTATCTCAAAGGCAATGGTACTTCAGAACAAGACTAATTGGTTTGAAAGTTAGATCACTGCTTATTGCAGCTATTTATCAGAAGCAACTAAGACTATCCAATGCTGCTAGATTGGTGCATTCTGGTGGTGAGATCATGAATTATGTGAATGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACATGGACCACCAGTGTTCAGCTTTGTATCGCCTTAGTAGTACTTTTTCGCGCCGTTGGGCTCGCCACATTCGCTTCCTTGGCAGTGATACTTCTCACTGTGCTTTGCAACACTCCACTTGCAAAGTTACAGCACAAGTTCCAGAGGAAACTTATGGTGGCGCAAGACGAGAGATTGAAGGCTACTTCTGAAGCTCTTGTGAATATGAAGGTGCTGAAGCTATATGCCTGGGAAACCAATTTCAGAAATGCCATTGAAAGATTGAGGAATGTTGAGCTCAAAAGACTTTCTGTAGTGCAATTGAGGAAAGCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTATCTGCTGCATCCTTTGGAGCATGCTACCTTCTTGGTGTTCCTCTACATGCCAACAATGTTTTCACTTTCGTCGCGACTCTGCGCCTCGTTCAAGATCCTATTAGAACCATCCCTGATGTTATTGGGGTGGTGATCCAAGCAAAAGTTGCATTCTCAAGGATTTTGAAATTCCTTGAGGCACCTGAACTAGACAGCCAAAGCTTCAGGAAGAAGCATTTTAGCGAAAACATGAGAGGTTCGATTTCAATAAAGTCTGCTGAGTTTTCATGGGAAGGTAATGGATCAAAACCAACTCTGAAGAACATAAATTTGGAGGTTAGAGCAGGGCAAAATGTGGCTATCTGTGGAGAAGTTGGCTCTGGAAAATCAACCCTCTTAGCTGCAATTCTCAGAGAAGTTCTCATTACTCGCGGAACTATTGAAGTTTATGGAAAGTTTGCCTATGTTTCTCAAACTGCATGGATACAGACAGGTACAATAAGGGATAACATATTGTTTGGATCAGCAATGGATGCTGAAAAGTATCAAGAAACACTTCACAGGTCTTCACTGATGAAGGACCTTGAGCTTTTTCCCCATGGTGATCTCACTGAGATAGGGGAAAGAGGGGTTAACCTGAGTGGAGGCCAGAAGCAACGGATTCAGCTCGCTCGCGCTCTTTACCAGAATGCTGATATATACCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTATTCAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTCACTCATCAAGTTGATTTTCTTCCAGCATTTGATTCTGTTTTGTTGATGGCAGAGGGGAAAATCCTACAAGCTGCTCCTTATCACCATCTCTTGAACTCAAGCAAAGAATTTCAGGATCTTGTCCAGGCTCACAAAGAAACCGCCGGATCGGACAGGCTCGTGGATGCTACTTCTTCTTCTAACAGACTTGCACACAATCCTGGGGAGATAAGGAAAACATATGTAGAGAATCAGTTGGAAACTTCGCGTGGCGAGCGCGATCAATTGATCAAGCAAGAAGAAAGAGAAGAAGGAGACAGGGGATTGAAGCCATACTTACAGTATCTGAATCAAAACAAAGGATATTTGTACTTCTCTGTGGCTGCACTTTCTCACCTCTCATTTGTGATTGGCCAGACATTGCAGAACTGGTGGATGGCTGATAAAGTTGATGATTCTAATGTCAGCACATTGCATCTCATTGTTGTCTACTTGTTGATTGGATTTGCTTCAACATTTTTCTTGTTGATTAGAAGCCTTGTAGCAGTTGCTTTGGGCCTTCAATCATCAAAATCTATGTTCTTACAGCTTTTGAATTCCCTCTTCCACGCGCCGGTGTCCTTCTATGACTCCACACCATTAGGAAGAATTCTTAGTAGGGTCTCCTCTGATCTGAGCATTGTGGATCTTGATGTTCCATTTAGCCTTGTTTTCGCAGTTGGAGCTACTAACACTTGCTATGCCAATCTTATAGTCTTAGCAGTCATTACTTGGCAAGTGTTGTGTGTCTCTATACCAATGGTTTACATAGCAATTCGCTTGCAGAGCTACTACTTTGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTATGTAGCCAATCATTTAGCCGAATCTGTTGCCGGGGCTGCAACGATAAGGGCTTTCGAGGAAGAACACAGGTTTTTCATGAAGAATCTTGATCTCATTGATGTGAATGCAAGCCCTTTCTTCCACAGCTTTGCAGCAAATGAGTGGCTGATGCTACGCTTAGAAACAATCAGTGCAGTTGTTTTTGCAGCCGCAGCACTTTCCATGGTGGTGCTTCCACCAGGGACTTTCACCTCAGGATTCATTGGCATGGCTCTATCATATGGACTTTCATTAAACTCGTCCCTAGTATTTGCAATTCAAAATCAATGCACTGTAGCAAACCAGATAATCTCAGTGGAGAGGCTAAACCAATACATGAATATAGCAAGTGAGGCACCACAAGTTATACAAGAAAATCGTCCTCCTCCCAATTGGCCTATTAAGGGAAAAGTACAAATTCATAATTTGCAGATAAGATACCGGGAAAGTGCACCACTTGTATTACGTGGAATCACGTGCACGTTTGAAGGAGGGCACAAGATTGGAATAGTTGGAAGAACAGGGAGTGGAAAATCAACATTAATAGGTGCATTGTTCCGGCTGGTGGAGCCAGCAGGTGGAAGGATCATTGTTGATGGGATTGATATTTCTTCAATTGGACTCCATGATTTGAGGTCACGTTTTGGTATCATACCTCAGGATCCTACTCTCTTTAATGGCACTGTTAGATACAATTTGGACCCTTTATCTCACCACTCTGATCATGATATTTGGCAGGTTCTTGGAAAGTGCCAGTTGCTAGAAGTTGTGAAAGAGAAAGAAGGAGGCTTAGAATCTTCGGTTGTTGAAGCTGGGGCGAACTGGAGCATGGGACAACGGCAACTGTTCTGTTTGGGGCGTGCACTTCTGAGGAGAAGTAAGATTTTGGTGCTGGATGAAGCAACTGCATCCATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATCAGAACCGAGTTTGCAGATTGTACTGTAATCACAGTTGCACATAGGATTCCAACTGTCATGGATTGCACTAAGGTCGCTGCTATCAGTGATGGAGAATTGGTTGAGTATGATGAGCCCATGAACTTGATGAAGCAGGAAGGATCATTGTTTGGACAACTTGTTAAGGAATATTGGTCTCATTTTCAGTCAGCAGAATCTCACTGA 4461 0.419 MESFWRMFCGESGCSGNPYCSYDFKFLKDPSSCINHFLILCIHVLLVIMISSITMFHKPSPLKKQHHHGQSYSRLQLVSAIANGSLGLVHLISGFWFLDENLRKTRTVFPLDWWFLEFIQGLSWLFVGLTMSLRVKQLPRTWLRLISVLIFLISGILCALSLFYAVSSRGISLKVVLDVLSFGGAISLLLCSYKESKHRDFEGEENYESLYMPLNDESMSNSIDSDSVSSVTLFSGAGIFSWMSFWWLNPLMKRGKQKTLQEQDIPKLREADRAESCYFQFQEQLNKQKMKEQSAQQPSLLKTIIMCHWKEILISGFFALLKVITLSCGPLLLNSFILVAEGNESFKHEGYVLAISLVITKIIESLSQRQWYFRTRLIGLKVRSLLIAAIYQKQLRLSNAARLVHSGGEIMNYVNVDAYRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVILLTVLCNTPLAKLQHKFQRKLMVAQDERLKATSEALVNMKVLKLYAWETNFRNAIERLRNVELKRLSVVQLRKAYSNFLFWASPVLVSAASFGACYLLGVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFSRILKFLEAPELDSQSFRKKHFSENMRGSISIKSAEFSWEGNGSKPTLKNINLEVRAGQNVAICGEVGSGKSTLLAAILREVLITRGTIEVYGKFAYVSQTAWIQTGTIRDNILFGSAMDAEKYQETLHRSSLMKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMAEGKILQAAPYHHLLNSSKEFQDLVQAHKETAGSDRLVDATSSSNRLAHNPGEIRKTYVENQLETSRGERDQLIKQEEREEGDRGLKPYLQYLNQNKGYLYFSVAALSHLSFVIGQTLQNWWMADKVDDSNVSTLHLIVVYLLIGFASTFFLLIRSLVAVALGLQSSKSMFLQLLNSLFHAPVSFYDSTPLGRILSRVSSDLSIVDLDVPFSLVFAVGATNTCYANLIVLAVITWQVLCVSIPMVYIAIRLQSYYFATAKELMRMNGTTKSYVANHLAESVAGAATIRAFEEEHRFFMKNLDLIDVNASPFFHSFAANEWLMLRLETISAVVFAAAALSMVVLPPGTFTSGFIGMALSYGLSLNSSLVFAIQNQCTVANQIISVERLNQYMNIASEAPQVIQENRPPPNWPIKGKVQIHNLQIRYRESAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGRIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSHHSDHDIWQVLGKCQLLEVVKEKEGGLESSVVEAGANWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVAAISDGELVEYDEPMNLMKQEGSLFGQLVKEYWSHFQSAESH 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04080 1486 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524|GO:0016887
Arst9g04080 1486 FunFam ABC transporter C family member 3 1223 1475 - -
Arst9g04080 1486 SUPERFAMILY ABC transporter transmembrane region 301 606 IPR036640 GO:0005524|GO:0016020
Arst9g04080 1486 CDD ABCC_MRP_domain2 1238 1458 - -
Arst9g04080 1486 Gene3D ABC transporter type 1, transmembrane domain 301 603 IPR036640 GO:0005524|GO:0016020
Arst9g04080 1486 FunFam ABC transporter C family member 10 611 864 - -
Arst9g04080 1486 FunFam ABC transporter C family member 5 889 1221 - -
Arst9g04080 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 593 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst9g04080 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 851 IPR027417 -
Arst9g04080 1486 Pfam ABC transporter 1257 1405 IPR003439 GO:0005524
Arst9g04080 1486 Gene3D - 604 870 IPR027417 -
Arst9g04080 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1467 IPR027417 -
Arst9g04080 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 851 IPR003439 GO:0005524
Arst9g04080 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst9g04080 1486 Pfam ABC transporter transmembrane region 935 1176 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst9g04080 1486 Pfam ABC transporter transmembrane region 313 568 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst9g04080 1486 Gene3D - 1223 1475 IPR027417 -
Arst9g04080 1486 SUPERFAMILY ABC transporter transmembrane region 913 1222 IPR036640 GO:0005524|GO:0016020
Arst9g04080 1486 FunFam ABC transporter C family member 10 296 609 - -
Arst9g04080 1486 Gene3D ABC transporter type 1, transmembrane domain 888 1221 IPR036640 GO:0005524|GO:0016020
Arst9g04080 1486 CDD ABCC_MRP_domain1 628 828 - -
Arst9g04080 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1474 IPR003439 GO:0005524
Arst9g04080 1486 SMART AAA_5 1266 1451 IPR003593 GO:0016887
Arst9g04080 1486 SMART AAA_5 655 828 IPR003593 GO:0016887
Arst9g04080 1486 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Arst9g04080 1486 CDD ABC_6TM_ABCC_D2 922 1215 IPR044726 GO:0140359
Arst9g04080 1486 CDD ABC_6TM_ABCC_D1 314 601 IPR044746 GO:0140359
Arst9g04080 1486 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 236 1474 - -
Arst9g04080 1486 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 236 1474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04080 Arst-Chr9 115923987 115930207 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04080 622 870 Calmodulin-binding Proteins AT2G36910 28.253 3.29e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04080 K05666 - gmx:100784336 2376.67