Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04069 ATGGCAGCTACATTCACCATCACAACAACAGCGGCAGCAACTCTCTCAAATGTTTCAGGAAACAGGAGCAGAATCAGAGGTTTGAACCCTAACCCTAACGCTATCAACACCAGTTCCAGTTGCAGTGCGATTGCTACTTCATCGAAGCACAGGCTCCTCGGGGGGATTCTTCATCCGCGACTGAATGCGATTCCGCTCGTAAGAACCACGAGGCAAAGGGGTTTTGTGCGGGCGAGTTCGGAGGATGCACCACTACAGTCCAAAGTAACTCACAAGGTGTTCTTCGACATCAGCATTGGAAACCCCGTTGGGAAGCTTGCTGGGAGGATTGTGATTGGACTGTTCGGTGACGATGTTCCTCAAACTGCAGAGAATTTCCGCGCCCTCTGCACCGGAGAGAAGGGTTTTGGTTATAAGGGCTCCACCTTCCACCGTGTAATCAAGGATTTCATGATTCAAGGAGGAGACTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATACGGGCGCACCTTCAAAGATGAGAATTTTAAACTCTCTCATACTGGACCTGGAGTTGTGAGCATGGCAAATGCAGGCCCCAACACAAATGGAAGTCAGTTTTTCATTTGCACGGTGAAGACACCATGGCTGGATCAGAGGCATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGCTGATTGAATCGCAGGAGACAGATCGGGGAGACCGTCCAAGAAAGAAGGTTACCATCAGTGACTCTGGTGAGCTTCCAATTGCTTGA 777 0.4891 MAATFTITTTAAATLSNVSGNRSRIRGLNPNPNAINTSSSCSAIATSSKHRLLGGILHPRLNAIPLVRTTRQRGFVRASSEDAPLQSKVTHKVFFDISIGNPVGKLAGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVTISDSGELPIA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04069 258 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 94 254 IPR002130 GO:0000413|GO:0003755
Arst9g04069 258 MobiDBLite consensus disorder prediction 234 249 - -
Arst9g04069 258 CDD cyclophilin_ABH_like 91 253 - -
Arst9g04069 258 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 92 255 - -
Arst9g04069 258 Gene3D - 78 257 IPR029000 -
Arst9g04069 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Arst9g04069 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Arst9g04069 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 155 IPR002130 GO:0000413|GO:0003755
Arst9g04069 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 201 213 IPR002130 GO:0000413|GO:0003755
Arst9g04069 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 214 229 IPR002130 GO:0000413|GO:0003755
Arst9g04069 258 SUPERFAMILY Cyclophilin-like 85 255 IPR029000 -
Arst9g04069 258 MobiDBLite consensus disorder prediction 234 258 - -
Arst9g04069 258 FunFam Peptidyl-prolyl cis-trans isomerase 79 258 - -
Arst9g04069 258 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 138 155 IPR020892 GO:0003755|GO:0006457
Arst9g04069 258 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 107 251 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04069 Arst-Chr9 115820004 115822817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04069 108 249 U-box Gene Family AT5G67530 48.951 5.25e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04069 K03768 - zju:107417611 363.229