Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03989 ATGCCGGAGCTTCGTAGTGGAGTGCGACGTGGTCGCGCTGCGGTAGGCCAAAAGGGCTCGGAACCACCGGCACCGGCAAGGAAGAACGTGAAGACACGCGCTCCTGCTGCGGCGGCGGGGGTTAAGGGTAGGCCCAAGACAAAGGCGGCGGCGGCGGCAGCGGCGAAGAAGCCGGTGATCGTGACATCGGAAGCGAAGGCGAAAGAGGTTAAAGAAAAGGTTTTCGGCGTGATGGGTGATGATAGTGGTGGCTTGAGCGCCAACAAGGGTGCTGCACCCGAAGATAACACTCCCCCTTTTCCTGAGAGGGTTCAAGTTGGAGGATCACCTATGTACAAGGTTGACAGGAAACTGGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGCCGTCGTGAGCGTGCAACAGGTCCTGGAGCTGCCGAGGTGGCTCTGAAATTCGAACATAGGAACAGTAAAGGCTGTAACTATGGCCCTCCATATGAGTGGCAAGTTTACAACATCCTTGGTGGTAGTCATGGAATACCTAGGGTACACTACAAAGGAAGACAAGGAGAATATTACATAATGGTTATGGACATGCTTGGTCCGAGTTTGTGGGATGTCTGGAATTCCTCAAGCCAGACGATGTCTGCTGAAATGGTTTCATGCATAGCTGTTGAATCCTTATCAATACTCGAGAAGATGCACTCGAAGGGCTATGTACATGGAGATGTAAAACCAGAGAACTTCTTACTAGGTCAGCCATCTACAGCACAAGAGAAGAAACTGTTTCTGGTAGACCTTGGATTAGCAACAAAGTGGCGAGACACCTCAAGTGGGATGCATGTTGATTATGATCAGCGTCCTGACATGTTTAGAGGGACTGTTCGATATGCTAGTGTTCATGCTCATTTGGGAAGAACTGCAAGTAGAAGGGATGATCTTGAATCTCTTGCATACACACTCATCTTCCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGTGATACCAAGTCCTTCCTCGTTTGCAAAAAGAAGATGGGGACATCGCCTGAGATGCTGTGCTGCTTTTGCCCTGCTCCATTTAGGCATTTTCTTGAGGTTGTAGTGAACATGAAATTTGATGAAGAACCCAACTATTCCAAGTTAATATCACTGTTTAATGGAATACTTGACCCGAATCCAGCATTGCGGCCACTTAATACTGACGGTGCTCAGAAGGTTGGACAAAAGCGGGGTAGACTGAATATGGAGGAAGAGGATGATTCACAGCCAAAGAAGAAGGTTCGATTAGGGGTTCCTGCTACACAATGGATTTCAGTTTACAATGCAAGACTGCCCATGAAACAAAGGTATCATTACAATGTGGCTGATGCAAGACTAGCACAGCATGTTGAGAGAGGAATTGCAGATGGCCTTCTTATTAGTTGTGTATCATCATGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGATTTACAAATCAAGTCTATAAGTTGTCACCTTTTTTCTTGCACAAGGAATGGATCATGGAGCAGTGGGATAAGAATTATTACATCACTTCTATTGCAGGGGGAAATAATGGAACCTCTCTTGTGGTGATGTCAAAAGGTACACAGTATACTCAACAATCATACAAAGTAAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACATCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGCAATGCTGGATTCAGTGATCAGGTGGTTGAACTTGATTTTCTCTATCCAAGTGAGGGTATCCATCGACGTTGGGACGGTGGTTATAGAATTACCGCAACTGCTGCTACGTTGGACCAATCTGCTCTAATATTAAGTATTCCGAGACGCAAGCCAGGAGATGAAACTCAGGAAACTCTACGTACATCTCAATTTCCCAGCACACATGTTAAGGAGAAATGGTCAAAGAATCTTTATCTTGCTTGTTTGTGCTATGGGCGTACTGTATGCTGA 2010 0.4612 MPELRSGVRRGRAAVGQKGSEPPAPARKNVKTRAPAAAAGVKGRPKTKAAAAAAAKKPVIVTSEAKAKEVKEKVFGVMGDDSGGLSANKGAAPEDNTPPFPERVQVGGSPMYKVDRKLGKGGFGQVFVGRRERATGPGAAEVALKFEHRNSKGCNYGPPYEWQVYNILGGSHGIPRVHYKGRQGEYYIMVMDMLGPSLWDVWNSSSQTMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPSTAQEKKLFLVDLGLATKWRDTSSGMHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDTKSFLVCKKKMGTSPEMLCCFCPAPFRHFLEVVVNMKFDEEPNYSKLISLFNGILDPNPALRPLNTDGAQKVGQKRGRLNMEEEDDSQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADARLAQHVERGIADGLLISCVSSCSNLWALIMDAGTGFTNQVYKLSPFFLHKEWIMEQWDKNYYITSIAGGNNGTSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWKEGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDGGYRITATAATLDQSALILSIPRRKPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03989 669 CDD STKc_CK1 111 382 - -
Arst9g03989 669 MobiDBLite consensus disorder prediction 396 422 - -
Arst9g03989 669 Gene3D Transferase(Phosphotransferase) domain 1 91 429 - -
Arst9g03989 669 PANTHER CASEIN KINASE-RELATED 106 631 - -
Arst9g03989 669 FunFam casein kinase 1-like protein HD16 86 425 - -
Arst9g03989 669 ProSiteProfiles Protein kinase domain profile. 112 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03989 669 SUPERFAMILY Protein kinase-like (PK-like) 112 394 IPR011009 -
Arst9g03989 669 Pfam Protein kinase domain 112 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03989 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Arst9g03989 669 SMART serkin_6 112 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03989 669 MobiDBLite consensus disorder prediction 1 46 - -
Arst9g03989 669 MobiDBLite consensus disorder prediction 407 422 - -
Arst9g03989 669 MobiDBLite consensus disorder prediction 80 107 - -
Arst9g03989 669 ProSitePatterns Protein kinases ATP-binding region signature. 118 145 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03989 Arst-Chr9 115268460 115272953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03989 23 264 EF-hand Containing Proteins AT2G17890 24.111 3.21e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Arst9g03989 Pkinase 1.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03989 - - gmx:100819969 1182.93