Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03970 ATGTGGATTTTAGGTGCAGATAAGAGTGTTATTACTATCATGTGTCTCCACATCTTATGTTTATTACTTCTATTGAAAGTAAATGCAAAAGAAGAATCATATGAATCTGATGATAGAGTCATAAATCTTCCTGGTCAGCCTTCAAGCCCATCAGTTTCACACTTCTCAGGTTATATCACTGTCAATGAAGATCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTGAACCTTCCAATAAGCCCCTCCTTCTTTGGCTCAATGGAGGACCTGGATGTTCCTCCATTGGTTATGGTGCAGTTGTTGAGGTAGGACCTCTTATCATCAACCAAAATGGTGATGGTCTGCATTTCAACCCATATTCTTGGTATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCAGTTGGAGTTGGTTTTTCTTACAGCAATACAACTTCTGATTATCTCACCATTTTAGAGGATAATCTTGTGGCTGAGGATTCCTACAATTTCTTGGTGAATTGGCTGCAACAATTCCCACAATTCAAATCCAGGGACTTTTTCATAGCTGGAGAAAGCTATGGTGGGCACTATATCCCCCAACTCGCAGAGCTAGTCTTCGATCGAAACAAAGATAAAAGCAAATACCCTTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAAAAACTGATGATTACTATGATAATAAAGGCCTTGTGGAATATGCATGGAGCCATGCAGTTATACCAGACCAACAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGAAATCTGAATGGTCTAATGAATGTAACATTGCCATGAATGAAATCTTCACAGATTACTCAGAGATTGACATATACAACATTTATGCTCCGTCGTGTCGTCTTAATAACTCATTTAACAATAATCATGGCCGGGAACCACTCACAAAGATGATGAGAATTGGAAATAATAATTATAAAGTAAAGAGGATGAGAATTTATTTTGAAGGCTATGATCCATGCTATTCCACATATGCAGAGGAATATTTCAATAGGGTGGATGTTCAATCATCTTTTCATGCAAATATTAGAGGAGGAAATACTAATAATGCAGCATGGAAAGTTTGCAATGATTCCATATTGAGGAGTTACAATTTCTCTGTATTTTCGGTCCTACCAATCTACACAAAACTCATCAAAGGTGGCCTTAAAATATGGATTTACAGTGGAGACACAGATGGGAGAATACCAGTGATAGGGACACGGTATTGGGTTGAAGCTCTGGGATTATCTCTGAAGTCTAGTTGGCAGAATTGGTACCATGACAATCAGGTTGGTGGAAGGATAGTGGAATATGAAGGGCTAACATACGTGACAGTGAGAGGGGCAGGTCACTTGGTACCATTAAACAAACCAAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTTTCAGGCCAACATCTTCCTACTCATCACAAATAA 1461 0.3854 MWILGADKSVITIMCLHILCLLLLLKVNAKEESYESDDRVINLPGQPSSPSVSHFSGYITVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEVGPLIINQNGDGLHFNPYSWYQEANLLFVESPVGVGFSYSNTTSDYLTILEDNLVAEDSYNFLVNWLQQFPQFKSRDFFIAGESYGGHYIPQLAELVFDRNKDKSKYPFINLKGFIVGNPKTDDYYDNKGLVEYAWSHAVIPDQQYDKAKQVCDFKKSEWSNECNIAMNEIFTDYSEIDIYNIYAPSCRLNNSFNNNHGREPLTKMMRIGNNNYKVKRMRIYFEGYDPCYSTYAEEYFNRVDVQSSFHANIRGGNTNNAAWKVCNDSILRSYNFSVFSVLPIYTKLIKGGLKIWIYSGDTDGRIPVIGTRYWVEALGLSLKSSWQNWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLSGQHLPTHHK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03970 486 FunFam Carboxypeptidase 384 478 - -
Arst9g03970 486 Gene3D - 384 478 - -
Arst9g03970 486 Gene3D - 334 373 - -
Arst9g03970 486 Pfam Serine carboxypeptidase 44 478 IPR001563 GO:0004185|GO:0006508
Arst9g03970 486 Gene3D alpha/beta hydrolase 32 303 IPR029058 -
Arst9g03970 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 465 IPR001563 GO:0004185|GO:0006508
Arst9g03970 486 FunFam Carboxypeptidase 34 295 - -
Arst9g03970 486 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Arst9g03970 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Arst9g03970 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Arst9g03970 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Arst9g03970 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Arst9g03970 486 SUPERFAMILY alpha/beta-Hydrolases 36 482 IPR029058 -
Arst9g03970 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03970 Arst-Chr9 115166238 115169791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03970 355 481 Calmodulin-binding Proteins AT2G22960 31.250 1.76e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03970 K16297 - gmx:100815141 772.696