Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03968 ATGCCATTTCGAGCTCGCACTGCAATCTTCCGTTGGTCTCTGCATACTGTTCCTTACCGTATCCATCACCATCAACCTCATTCTCTTCACTCTTCTTCTTCTTTCATTCCCCACAAGTTCACTTCTTTAGCCCAAACTCAGGTTTATGGCGAATCTGTTGAAACAAGTGACGATGATGGATTTTTGTCATGGTTGGAGCGGAAAGCTGGGAAAACAATGCTCAATTTGAAGTTCATTGTAATCCTAATCCTAAGGTCTCTGTTTGCTTCTAAGGCGATAAAAACCGGAGATTGTATTTTGAAGGTTCCTTATAGAGTGCAAATAACAGCAGATAATCTCCCTGCTAAGATCAAATCTCTGATCAGTGAGGAAGTTGCGAATGTTGCAAAACTTGCTGTTCTTCTTCTAATTGAGCGGAAATTGGGTCAGGGCTCTCAGTGGAATCCTTATATCTGCCGTCTACCATGGCAAGAGGAGTTGCATAACACGATTTTTTGGAATGAAAGTGAGCTGGAGATGATTCATCGAAGCTCAGTTTATTGGGAAACAATTAACCAAAAGTCTCAAATGGAAAGGGACTTCTTGGCAATCAGGCCTATTTTTGAATGTTTCAGTCAAAGTTTTGGAGATATTACTTATAAAGACTTCATGTATGCATGCACATTAGTTGGTTCTCGAGCATGGGGAAGCACCAATGGTTTATCTCTGATTCCTTTTGCAGATTTTGTAAACCATGACGGGAACTCAGAAGCAATTGTGATGAGTGATGATGACAAACAATTATCAGAAGTTATCTCTGATCGTGCCTATGCGCCTGGGGAGCAGGTACTGATAAGATATGGAAAGTTTTCAAATGCTACATTAATGTTAGACTTCGGTTTTACAGTCCCCTACAACATTTATGACCAGGTTCAGATCCAGTTAGATATACCTAAGCATGATCCTCTGCACAAGATGAAGTTGGAACTCATGCAACAATACTTTGTGCCTTCAAGGAAAAACGCGGAAAACTTGGAACATTCTTGGAACATCTTCACAATCAAGGAGGTCAAGTGGCCTAAAGGAAAAGGGAAAGGTCTTCCGCAATCGCTTCGTGCTTTTGCTCGTGTTCTTTCTTGTACTAATCGTCAAGAACTTGATGATCTGGTTGTGGAAGCTGCACAAACTGATGGTAGGCTAGGTAGGCGTCCGTTACCGGATGTCAACAAAGAGATTCAAGCCCACCTGATGTTATCGTCATTAATCGGCCAATTAATTGAGGAGCGCAGTGCAGCCATTATGTCATTGGAGGAGTCTTCCAATTCTTCATCATTTTGTGTAAGAGTTCCTGTTAGAAGATTCATGGCCCAGGATCTCCTACGTGGCGAACTTCGCATTCTGAATTCTGCTTTTACATGGCTGGAGAACTACTGTTTGTCGTCGACTTAA 1428 0.4181 MPFRARTAIFRWSLHTVPYRIHHHQPHSLHSSSSFIPHKFTSLAQTQVYGESVETSDDDGFLSWLERKAGKTMLNLKFIVILILRSLFASKAIKTGDCILKVPYRVQITADNLPAKIKSLISEEVANVAKLAVLLLIERKLGQGSQWNPYICRLPWQEELHNTIFWNESELEMIHRSSVYWETINQKSQMERDFLAIRPIFECFSQSFGDITYKDFMYACTLVGSRAWGSTNGLSLIPFADFVNHDGNSEAIVMSDDDKQLSEVISDRAYAPGEQVLIRYGKFSNATLMLDFGFTVPYNIYDQVQIQLDIPKHDPLHKMKLELMQQYFVPSRKNAENLEHSWNIFTIKEVKWPKGKGKGLPQSLRAFARVLSCTNRQELDDLVVEAAQTDGRLGRRPLPDVNKEIQAHLMLSSLIGQLIEERSAAIMSLEESSNSSSFCVRVPVRRFMAQDLLRGELRILNSAFTWLENYCLSST 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03968 475 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 53 294 - -
Arst9g03968 475 SUPERFAMILY SET domain 59 299 IPR046341 -
Arst9g03968 475 Gene3D - 297 470 IPR036464 -
Arst9g03968 475 Pfam SET domain 85 281 IPR001214 GO:0005515
Arst9g03968 475 Gene3D set domain protein methyltransferase, domain 1 57 295 - -
Arst9g03968 475 Pfam Rubisco LSMT substrate-binding 312 460 IPR015353 -
Arst9g03968 475 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 59 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03968 Arst-Chr9 115125409 115132060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03968 93 269 NAC Transcription Factor Family AT3G56570 23.370 3.29e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst9g03968 SET 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03968 K19199 - gmx:100818002 593.193