Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03966 ATGCCATTTCGAGCTCGCACTGCAATCTTCCGTTGGTCTCTGCATACTGTTCCTTACCGTATCCATCACCATCAACCTCATTCTCTTCACTCTTCTTCTTCTTTCATTCCCCACAAGTTCACTTCTTTAGCCCAAACTCAGGTTTATGGCGAATCTGTTGAAACAAGTGACGATGATGGATTTTTGTCATGGTTGGAGCGGAAAGCTGGTTGTAGAATTTCTTCATCGCTTTCAATTGGGAAAACAATGCTCAATTTGAAGTTCATTGTAATCCTAATCCTAAGGTCTCTGTTTGCTTCTAAGGCGATAAAAACCGGAGATTGTATTTTGAAGGTTCCTTATAGAGTGCAAATAACAGCAGATAATCTCCCTGCTAAGATCAAATCTCTGATCAGTGAGGAAGTTGCGAATGTTGCAAAACTTGCTGTTCTTCTTCTAATTGAGCGGAAATTGGGTCAGGGCTCTCAGTGGAATCCTTATATCTGCCGTCTACCATGGCAAGAGGAGTTGCATAACACGATTTTTTGGAATGAAAGTGAGCTGGAGATGATTCATCGAAGCTCAGTTTATTGGGAAACAATTAACCAAAAGTCTCAAATGGAAAGGGACTTCTTGGCAATCAGGCCTATTTTTGAATGTTTCAGTCAAAGTTTTGGAGATATTACTTATAAAGACTTCATGTATGCATGCACATTAGTTGGTTCTCGAGCATGGGGAAGCACCAATGGTTTATCTCTGATTCCTTTTGCAGATTTTGTAAACCATGACGGGAACTCAGAAGCAATTGTGATGAGTGATGATGACAAACAATTATCAGAAGTTATCTCTGATCGTGCCTATGCGCCTGGGGAGCAGGTACTGATAAGATATGGAAAGTTTTCAAATGCTACATTAATGTTAGACTTCGGTTTTACAGTCCCCTACAACATTTATGACCAGGTTCAGATCCAGTTAGATATACCTAAGCATGATCCTCTGCACAAGATGAAGTTGGAACTCATGCAACAATACTTTGTGCCTTCAAGGAAAAACGCGGAAAACTTGGAACATTCTTGGAACATCTTCACAATCAAGGAGGTCAAGTGGCCTAAAGGAAAAGGGAAAGGTCTTCCGCAATCGCTTCGTGCTTTTGCTCGTGTTCTTTCTTGTACTAATCGTCAAGAACTTGATGATCTGGTTGTGGAAGCTGCACAAACTGATGGTAGGCTAGGTAGGCGTCCGTTACCGGATGTCAACAAAGAGATTCAAGCCCACCTGATGTTATCGTCATTAATCGGCCAATTAATTGAGGAGCGCAGTGCAGCCATTATGTCATTGGAGGAGTCTTCCAATTCTTCATCATTTTGTGTAAGAGTTCCTGTTAGAAGATTCATGGCCCAGGATCTCCTACGTGGCGAACTTCGCATTCTGAATTCTGCTTTTACATGGCTGGAGAACTACTGTTTGTCGTCGACTTAA 1458 0.4163 MPFRARTAIFRWSLHTVPYRIHHHQPHSLHSSSSFIPHKFTSLAQTQVYGESVETSDDDGFLSWLERKAGCRISSSLSIGKTMLNLKFIVILILRSLFASKAIKTGDCILKVPYRVQITADNLPAKIKSLISEEVANVAKLAVLLLIERKLGQGSQWNPYICRLPWQEELHNTIFWNESELEMIHRSSVYWETINQKSQMERDFLAIRPIFECFSQSFGDITYKDFMYACTLVGSRAWGSTNGLSLIPFADFVNHDGNSEAIVMSDDDKQLSEVISDRAYAPGEQVLIRYGKFSNATLMLDFGFTVPYNIYDQVQIQLDIPKHDPLHKMKLELMQQYFVPSRKNAENLEHSWNIFTIKEVKWPKGKGKGLPQSLRAFARVLSCTNRQELDDLVVEAAQTDGRLGRRPLPDVNKEIQAHLMLSSLIGQLIEERSAAIMSLEESSNSSSFCVRVPVRRFMAQDLLRGELRILNSAFTWLENYCLSST 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03966 485 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 59 432 - -
Arst9g03966 485 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 53 304 - -
Arst9g03966 485 Pfam Rubisco LSMT substrate-binding 322 470 IPR015353 -
Arst9g03966 485 Gene3D set domain protein methyltransferase, domain 1 57 305 - -
Arst9g03966 485 Pfam SET domain 95 291 IPR001214 GO:0005515
Arst9g03966 485 SUPERFAMILY SET domain 59 309 IPR046341 -
Arst9g03966 485 Gene3D - 307 480 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03966 Arst-Chr9 115125409 115132060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03966 103 279 NAC Transcription Factor Family AT3G56570 23.370 3.37e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst9g03966 SET 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03966 K19199 - gmx:100818002 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03966 9 115125409 115132060 Arst9g03966 9 115125409 115132060 ECH