Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03965 ATGCCATTTCGAGCTCGCACTGCAATCTTCCGTTGGTCTCTGCATACTGTTCCTTACCGTATCCATCACCATCAACCTCATTCTCTTCACTCTTCTTCTTCTTTCATTCCCCACAAGTTCACTTCTTTAGCCCAAACTCAGGTTTATGGCGAATCTGTTGAAACAAGTGACGATGATGGATTTTTGTCATGGTTGGAGCGGAAAGCTGGTTGTAGAATTTCTTCATCGCTTTCAATTGGTAAATCTTCATATGGCAGGTCTCTGTTTGCTTCTAAGGCGATAAAAACCGGAGATTGTATTTTGAAGGTTCCTTATAGAGTGCAAATAACAGCAGATAATCTCCCTGCTAAGATCAAATCTCTGATCAGTGAGGAAGTTGCGAATGTTGCAAAACTTGCTGTTCTTCTTCTAATTGAGCGGAAATTGGGTCAGGGCTCTCAGTGGAATCCTTATATCTGCCGTCTACCATGGCAAGAGGAGTTGCATAACACGATTTTTTGGAATGAAAGTGAGCTGGAGATGATTCATCGAAGCTCAGTTTATTGGGAAACAATTAACCAAAAGTCTCAAATGGAAAGGGACTTCTTGGCAATCAGGCCTATTTTTGAATGTTTCAGTCAAAGTTTTGGAGATATTACTTATAAAGACTTCATGTATGCATGCACATTAGTTGGTTCTCGAGCATGGGGAAGCACCAATGGTTTATCTCTGATTCCTTTTGCAGATTTTGTAAACCATGACGGGAACTCAGAAGCAATTGTGATGAGTGATGATGACAAACAATTATCAGAAGTTATCTCTGATCGTGCCTATGCGCCTGGGGAGCAGGTACTGATAAGATATGGAAAGTTTTCAAATGCTACATTAATGTTAGACTTCGGTTTTACAGTCCCCTACAACATTTATGACCAGGTTCAGATCCAGTTAGATATACCTAAGCATGATCCTCTGCACAAGATGAAGTTGGAACTCATGCAACAATACTTTGTGCCTTCAAGGAAAAACGCGGAAAACTTGGAACATTCTTGGAACATCTTCACAATCAAGGAGGTCAAGTGGCCTAAAGGAAAAGGGAAAGGTCTTCCGCAATCGCTTCGTGCTTTTGCTCGTGTTCTTTCTTGTACTAATCGTCAAGAACTTGATGATCTGGTTGTGGAAGCTGCACAAACTGATGGTAGGCTAGGTAGGCGTCCGTTACCGGATGTCAACAAAGAGATTCAAGCCCACCTGATGTTATCGTCATTAATCGGCCAATTAATTGAGGAGCGCAGTGCAGCCATTATGTCATTGGAGGAGTCTTCCAATTCTTCATCATTTTGTGTAAGAGTTCCTGTTAGAAGATTCATGGCCCAGGATCTCCTACGTGGCGAACTTCGCATTCTGAATTCTGCTTTTACATGGCTGGAGAACTACTGTTTGTCGTCGACTTAA 1431 0.4186 MPFRARTAIFRWSLHTVPYRIHHHQPHSLHSSSSFIPHKFTSLAQTQVYGESVETSDDDGFLSWLERKAGCRISSSLSIGKSSYGRSLFASKAIKTGDCILKVPYRVQITADNLPAKIKSLISEEVANVAKLAVLLLIERKLGQGSQWNPYICRLPWQEELHNTIFWNESELEMIHRSSVYWETINQKSQMERDFLAIRPIFECFSQSFGDITYKDFMYACTLVGSRAWGSTNGLSLIPFADFVNHDGNSEAIVMSDDDKQLSEVISDRAYAPGEQVLIRYGKFSNATLMLDFGFTVPYNIYDQVQIQLDIPKHDPLHKMKLELMQQYFVPSRKNAENLEHSWNIFTIKEVKWPKGKGKGLPQSLRAFARVLSCTNRQELDDLVVEAAQTDGRLGRRPLPDVNKEIQAHLMLSSLIGQLIEERSAAIMSLEESSNSSSFCVRVPVRRFMAQDLLRGELRILNSAFTWLENYCLSST 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03965 476 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 53 295 - -
Arst9g03965 476 Gene3D - 298 471 IPR036464 -
Arst9g03965 476 ProSiteProfiles SET domain profile. 69 282 IPR001214 GO:0005515
Arst9g03965 476 SUPERFAMILY SET domain 59 300 IPR046341 -
Arst9g03965 476 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 59 423 - -
Arst9g03965 476 Pfam Rubisco LSMT substrate-binding 313 461 IPR015353 -
Arst9g03965 476 Pfam SET domain 85 282 IPR001214 GO:0005515
Arst9g03965 476 Gene3D set domain protein methyltransferase, domain 1 57 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03965 Arst-Chr9 115125409 115132060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03965 60 270 NAC Transcription Factor Family AT3G56570 23.288 5.27e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst9g03965 SET 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03965 K19199 - gmx:100818002 617.846