Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03917 ATGATGACGTGGACCATCAAGAGAGAAAGAGAGCCTGAAAGCATAGCCATGGCCAACTATCTCATGCTGCTTTCTGGTGGTGCAGGACTTGAGAGAACCACCACCACCACCACCAGCAACAACCGTGTATTCGAGTGCAAGACATGTAACAGGCAATTCTCGTCGTTTCAGGCACTGGGAGGCCACCGTGCAAGCCACAAGAAGCCGAGGCTCATGAACGGAGAAGACAGCAGCAGTGATGATAGCCATGGCTCTCCGGCAAAGCCTAAGACTCACGAGTGCTCCGTTTGCGGCTTGGAGTTCGCCATTGGCCAAGCTTTGGGTGGCCACATGAGGCGTCACAGAACAGCACCGCCACCACCACCGCCGCCACCTTCTTCAGACGTGACTAGCAATAATAAAAGAAAGAGAGAAGTTATGTTTGTGGATCTGAACTTGACTCCCTTTGAGAATGATTTGGCATTCTTGAAGATTGGACAACCAACAATAACTACTCATCCTCCTAACTTGGTCCATTGTTTGTAA 525 0.5029 MMTWTIKREREPESIAMANYLMLLSGGAGLERTTTTTTSNNRVFECKTCNRQFSSFQALGGHRASHKKPRLMNGEDSSSDDSHGSPAKPKTHECSVCGLEFAIGQALGGHMRRHRTAPPPPPPPPSSDVTSNNKRKREVMFVDLNLTPFENDLAFLKIGQPTITTHPPNLVHCL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03917 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Arst9g03917 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Arst9g03917 174 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Arst9g03917 174 PANTHER ZINC FINGER PROTEIN ZAT5 9 151 - -
Arst9g03917 174 SMART c2h2final6 92 114 IPR013087 -
Arst9g03917 174 SMART c2h2final6 44 66 IPR013087 -
Arst9g03917 174 Pfam C2H2-type zinc finger 92 116 - -
Arst9g03917 174 Pfam C2H2-type zinc finger 43 69 - -
Arst9g03917 174 Gene3D Classic Zinc Finger 41 114 - -
Arst9g03917 174 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Arst9g03917 174 MobiDBLite consensus disorder prediction 108 133 - -
Arst9g03917 174 MobiDBLite consensus disorder prediction 68 88 - -
Arst9g03917 174 SUPERFAMILY beta-beta-alpha zinc fingers 42 114 IPR036236 -
Arst9g03917 174 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03917 Arst-Chr9 114796600 114797425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03917 6 156 C2H2 Transcription Factor Family AT2G37430 44.970 4.21e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst9g03917 zf-C2H2_6 9.9e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03917 - - gmx:100781134 190.66