Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03912 ATGATCCAAATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGGTGTTTGTGAAGGTTATGACTGATGAACAGTTAGAGACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGCGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTGCAGGAGTTCGGGTGGGGAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAAAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAAGGGAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATTACTTCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACATACTACTATTGAACCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGATTCCCAACAACAACAACATAGTACCATCATGATGACCAATGCTTCTGCTGCTAATCGGTCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTGAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 852 0.4073 MIQMIEWQKQLQNNEKADRTNNNMVFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLAGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITSELSHHGQISETNVYNWFQNRRARSKRKLQNNVPHTTIEPEVDAEVDSKDKKTRPEELIDSQQQQHSTIMMTNASAANRSEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03912 283 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 279 IPR044559 GO:0003700
Arst9g03912 283 ProSiteProfiles 'Homeobox' domain profile. 85 150 IPR001356 GO:0003677
Arst9g03912 283 MobiDBLite consensus disorder prediction 162 181 - -
Arst9g03912 283 MobiDBLite consensus disorder prediction 148 189 - -
Arst9g03912 283 CDD homeodomain 89 150 IPR001356 GO:0003677
Arst9g03912 283 Gene3D - 90 157 - -
Arst9g03912 283 Pfam Homeodomain 89 149 IPR001356 GO:0003677
Arst9g03912 283 SMART HOX_1 87 154 IPR001356 GO:0003677
Arst9g03912 283 SUPERFAMILY Homeodomain-like 87 152 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03912 Arst-Chr9 114758691 114761144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03912 4 283 Wox Gene Family AT4G35550 47.315 5.58e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst9g03912 Homeodomain 1.4e-18 CL0123