Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03910 ATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGGTGTTTGTGAAGGTTATGACTGATGAACAGTTAGAGACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGCGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTGCAGGAGTTCGGGTGGGGAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAAAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAAGGGAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATTACTTCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACATACTACTATTGAACCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGATTCCCAACAACAACAACATAGTACCATCATGATGACCAATGCTTCTGCTGCTAATCGGTCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTGAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 843 0.4081 MIEWQKQLQNNEKADRTNNNMVFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLAGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITSELSHHGQISETNVYNWFQNRRARSKRKLQNNVPHTTIEPEVDAEVDSKDKKTRPEELIDSQQQQHSTIMMTNASAANRSEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03910 280 SUPERFAMILY Homeodomain-like 84 149 IPR009057 -
Arst9g03910 280 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Arst9g03910 280 Gene3D - 87 154 - -
Arst9g03910 280 SMART HOX_1 84 151 IPR001356 GO:0003677
Arst9g03910 280 MobiDBLite consensus disorder prediction 159 178 - -
Arst9g03910 280 MobiDBLite consensus disorder prediction 145 186 - -
Arst9g03910 280 Pfam Homeodomain 86 146 IPR001356 GO:0003677
Arst9g03910 280 CDD homeodomain 86 147 IPR001356 GO:0003677
Arst9g03910 280 PANTHER WUSCHEL-RELATED HOMEOBOX 13 4 276 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03910 Arst-Chr9 114758670 114761144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03910 1 280 Wox Gene Family AT4G35550 47.315 6.32e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst9g03910 Homeodomain 1.4e-18 CL0123