Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03909 ATGTTTGCGCCTTTTATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGGTGTTTGTGAAGGTTATGACTGATGAACAGTTAGAGACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGCGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTGCAGGAGTTCGGGTGGGGAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAAAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAAGGGAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATTACTTCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACATACTACTATTGAACCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGATTCCCAACAACAACAACATAGTACCATCATGATGACCAATGCTTCTGCTGCTAATCGGTCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTGAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 858 0.4079 MFAPFMIEWQKQLQNNEKADRTNNNMVFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLAGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITSELSHHGQISETNVYNWFQNRRARSKRKLQNNVPHTTIEPEVDAEVDSKDKKTRPEELIDSQQQQHSTIMMTNASAANRSEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03909 285 Gene3D - 92 159 - -
Arst9g03909 285 MobiDBLite consensus disorder prediction 164 183 - -
Arst9g03909 285 SMART HOX_1 89 156 IPR001356 GO:0003677
Arst9g03909 285 MobiDBLite consensus disorder prediction 150 191 - -
Arst9g03909 285 CDD homeodomain 91 152 IPR001356 GO:0003677
Arst9g03909 285 PANTHER WUSCHEL-RELATED HOMEOBOX 13 9 281 IPR044559 GO:0003700
Arst9g03909 285 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Arst9g03909 285 Pfam Homeodomain 91 151 IPR001356 GO:0003677
Arst9g03909 285 SUPERFAMILY Homeodomain-like 89 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03909 Arst-Chr9 114758670 114761144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03909 6 285 Wox Gene Family AT4G35550 47.315 8.39e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst9g03909 Homeodomain 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03909 - - ahf:112777216 554.673