Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03892 ATGGGCGAAATGCAAAGCGCGGTTTTTGGCGCTAAAAAGCCAAAGTATAAAAAATGTGAAAGTGAAGAAGAAAGTGGAAAATTGGGAGAGGGAAGCAGCACATCGCAGGGGCAGAGAGTCGACGCAGTTGAATCTCGATCCTCGTCGGTTATTGTTCGCGGCAGGGATGGCAGCGCTTTCGTCAAATGCCAAGACTGCAAAGAGGACGTTCCTGTTGGACTTGTCAGCATGCATGGTTGCAGCGACGAAGCCAAAACTAAAATGAATCTCGAGACACAACTTGTGGAACGGCCTTATGAAGCTAAGAGACCAGTGAGGAAGAAGACAAGATCTGATGTACCAAAGGCTAAAAGGGCCAAAGTTGAGAAGACGAAGAAGGTGAAAGATCCACACGTGCCAAAGAAGCCTCCAGCAGCATCCTTCTTTCTCTTCATGGATGATTTTGAGAAATCTTTTAAGGAGGCAAATCCTGATTCAAAGGATGGTAACAGGGTTTTTAAAGAGGCTCGTGCCAAATGGAGGTCCATGACTGCTGAAGAGAAGAAGCCTTATTCTGATAAACTTGCTGAACTTAAAGCAGAATATGAGAAGGCTATGGAAATTTACAATGCTGCTGAAGCAGAAGGAGAAGAGGGAGAAGGTGAAGGAAAGCATGAAGAGGGGACTGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGAGGCTGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGGGGATGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGAGGAGCTGAATGATGAGGACTAA 828 0.4553 MGEMQSAVFGAKKPKYKKCESEEESGKLGEGSSTSQGQRVDAVESRSSSVIVRGRDGSAFVKCQDCKEDVPVGLVSMHGCSDEAKTKMNLETQLVERPYEAKRPVRKKTRSDVPKAKRAKVEKTKKVKDPHVPKKPPAASFFLFMDDFEKSFKEANPDSKDGNRVFKEARAKWRSMTAEEKKPYSDKLAELKAEYEKAMEIYNAAEAEGEEGEGEGKHEEGTDEQSDKEEAAAGEEEADEQSDKEEAAAGEEGDDEQSDKEEAAAGEEEELNDED 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03892 275 MobiDBLite consensus disorder prediction 202 275 - -
Arst9g03892 275 MobiDBLite consensus disorder prediction 13 27 - -
Arst9g03892 275 MobiDBLite consensus disorder prediction 1 49 - -
Arst9g03892 275 MobiDBLite consensus disorder prediction 202 228 - -
Arst9g03892 275 SUPERFAMILY HMG-box 120 205 IPR036910 -
Arst9g03892 275 Pfam HMG (high mobility group) box 135 203 IPR009071 -
Arst9g03892 275 Gene3D High mobility group box domain 115 215 IPR036910 -
Arst9g03892 275 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 41 238 - -
Arst9g03892 275 SMART hmgende2 133 204 IPR009071 -
Arst9g03892 275 MobiDBLite consensus disorder prediction 96 138 - -
Arst9g03892 275 MobiDBLite consensus disorder prediction 229 275 - -
Arst9g03892 275 Coils Coil 188 208 - -
Arst9g03892 275 MobiDBLite consensus disorder prediction 115 133 - -
Arst9g03892 275 MobiDBLite consensus disorder prediction 28 45 - -
Arst9g03892 275 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 134 203 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03892 Arst-Chr9 114684380 114686128 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Arst9g03892 HMG_box 2.2e-14 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03892 K25507 - aip:107619373 326.25