Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g03891 | ATGGCGAAGGGAAACAACACATCACAAGGGAGGAAGAGAGTGGACGCCGTTGATTCTCGATCTGCGTCGGTTCTTGTTCGCGCCAAGGATGGCAGCGCTTTCGCCAAATGCGATGAGTGCAAGAAGGATGTTCCTGTTGCACTCATCAGCATGCATAGTTGCAGCCTCGAAGCCAAAATCAAAATGAATCTCGAGGCACAAGTTGTGGAACAGGCTTCGGAAGTGAAGAAACCAGAGAGGAAGAAGCCGAAATCTAATGAACCAAAGGCTAAAAGAGCGAAAGTTGAGAAGACGAAGAAGGTGAAAGATCCAAATGCGCCAAAGCGTCCTCCCACAGCTTTCTTTCTCTTCATGGATGATTTTAGAAAATCTTTTAAGGAGGCAAATCCTGATTCAAAGGATGTTAAGAGGGTTAGTAAAGAGGCTGGTGAGAAATGGAGGTCCATGACTGATGAAGAGAAGAAGCCTTATTCCGATAAAGTTGTTGAGCTTAAAGCAGAATACGAGAAGGCTATGAAAAGTTATAATGATGCTGAAGTAGAAGGAGAAGAGGGAGAAGGAGAGCATGAAGAGGGGGCTGATGAAAAATCTGATAAGGAAGATGCTGCTGGTGAAGACGAGGAGTTGACTGATGAGGAGTAA | 642 | 0.4517 | MAKGNNTSQGRKRVDAVDSRSASVLVRAKDGSAFAKCDECKKDVPVALISMHSCSLEAKIKMNLEAQVVEQASEVKKPERKKPKSNEPKAKRAKVEKTKKVKDPNAPKRPPTAFFLFMDDFRKSFKEANPDSKDVKRVSKEAGEKWRSMTDEEKKPYSDKVVELKAEYEKAMKSYNDAEVEGEEGEGEHEEGADEKSDKEDAAGEDEELTDEE | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g03891 | 213 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Arst9g03891 | 213 | MobiDBLite | consensus disorder prediction | 173 | 213 | - | - | |
Arst9g03891 | 213 | CDD | HMG-box_AtHMGB1-like | 108 | 168 | - | - | |
Arst9g03891 | 213 | MobiDBLite | consensus disorder prediction | 127 | 157 | - | - | |
Arst9g03891 | 213 | SUPERFAMILY | HMG-box | 98 | 177 | IPR036910 | - | |
Arst9g03891 | 213 | Gene3D | High mobility group box domain | 102 | 179 | IPR036910 | - | |
Arst9g03891 | 213 | MobiDBLite | consensus disorder prediction | 72 | 106 | - | - | |
Arst9g03891 | 213 | Pfam | HMG (high mobility group) box | 107 | 176 | IPR009071 | - | |
Arst9g03891 | 213 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 12-RELATED | 10 | 202 | - | - | |
Arst9g03891 | 213 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 107 | 176 | IPR009071 | - | |
Arst9g03891 | 213 | SMART | hmgende2 | 106 | 177 | IPR009071 | - | |
Arst9g03891 | 213 | MobiDBLite | consensus disorder prediction | 70 | 112 | - | - | |
Arst9g03891 | 213 | Coils | Coil | 161 | 181 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g03891 | Arst-Chr9 | 114682800 | 114684275 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | HMG | Arst9g03891 | HMG_box | 3.8e-22 | CL0114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g03891 | K25507 | - | gmx:100810345 | 304.293 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst9g03891 | 9 | 114682800 | 114684275 | Arst9g03891 | 9 | 114682800 | 114684275 | ECH |