Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03891 ATGGCGAAGGGAAACAACACATCACAAGGGAGGAAGAGAGTGGACGCCGTTGATTCTCGATCTGCGTCGGTTCTTGTTCGCGCCAAGGATGGCAGCGCTTTCGCCAAATGCGATGAGTGCAAGAAGGATGTTCCTGTTGCACTCATCAGCATGCATAGTTGCAGCCTCGAAGCCAAAATCAAAATGAATCTCGAGGCACAAGTTGTGGAACAGGCTTCGGAAGTGAAGAAACCAGAGAGGAAGAAGCCGAAATCTAATGAACCAAAGGCTAAAAGAGCGAAAGTTGAGAAGACGAAGAAGGTGAAAGATCCAAATGCGCCAAAGCGTCCTCCCACAGCTTTCTTTCTCTTCATGGATGATTTTAGAAAATCTTTTAAGGAGGCAAATCCTGATTCAAAGGATGTTAAGAGGGTTAGTAAAGAGGCTGGTGAGAAATGGAGGTCCATGACTGATGAAGAGAAGAAGCCTTATTCCGATAAAGTTGTTGAGCTTAAAGCAGAATACGAGAAGGCTATGAAAAGTTATAATGATGCTGAAGTAGAAGGAGAAGAGGGAGAAGGAGAGCATGAAGAGGGGGCTGATGAAAAATCTGATAAGGAAGATGCTGCTGGTGAAGACGAGGAGTTGACTGATGAGGAGTAA 642 0.4517 MAKGNNTSQGRKRVDAVDSRSASVLVRAKDGSAFAKCDECKKDVPVALISMHSCSLEAKIKMNLEAQVVEQASEVKKPERKKPKSNEPKAKRAKVEKTKKVKDPNAPKRPPTAFFLFMDDFRKSFKEANPDSKDVKRVSKEAGEKWRSMTDEEKKPYSDKVVELKAEYEKAMKSYNDAEVEGEEGEGEHEEGADEKSDKEDAAGEDEELTDEE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03891 213 MobiDBLite consensus disorder prediction 1 22 - -
Arst9g03891 213 MobiDBLite consensus disorder prediction 173 213 - -
Arst9g03891 213 CDD HMG-box_AtHMGB1-like 108 168 - -
Arst9g03891 213 MobiDBLite consensus disorder prediction 127 157 - -
Arst9g03891 213 SUPERFAMILY HMG-box 98 177 IPR036910 -
Arst9g03891 213 Gene3D High mobility group box domain 102 179 IPR036910 -
Arst9g03891 213 MobiDBLite consensus disorder prediction 72 106 - -
Arst9g03891 213 Pfam HMG (high mobility group) box 107 176 IPR009071 -
Arst9g03891 213 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 10 202 - -
Arst9g03891 213 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 107 176 IPR009071 -
Arst9g03891 213 SMART hmgende2 106 177 IPR009071 -
Arst9g03891 213 MobiDBLite consensus disorder prediction 70 112 - -
Arst9g03891 213 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03891 Arst-Chr9 114682800 114684275 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Arst9g03891 HMG_box 3.8e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03891 K25507 - gmx:100810345 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03891 9 114682800 114684275 Arst9g03891 9 114682800 114684275 ECH