Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03846 ATGGAGAACGACACCGCCGCCACCAACACCAACGGCAGCGCCACCGCCACCGCCAAACTCGCAATTGCCGGTGGGAAATCAAACAGCCACAGCGAGGAAGAGGACCGCTCCAATTTCAACAACGGCGTGGAGGAGCACATGGCGGAGCAAGTGGATGAAGAAGAAGAGGAAGAAGCAGAAGCAGAAGAAGACAGTGACGGTGGCGAAGGCGGTGAAGGGGAACAAACTGGATCTGCTTCTCGGCAACCTTCGAGAACCCCTTTCACCAATCTCAGCCAGGTCGATGCTGACCTTGCCCTTGCACGAACCCTTCAGGAACAGGAAAGGGCATACATGATGCTTAGAATGAATAATGAAGGAAGTGACTATGGAAGTTGGGAAGCTGGGAGTTATTTGCATGATGATGGAGATGATTTTGATGATCTGCATGATGGAACTGATCTGGATGAAGACGATGAGGACGACGATGATGATGATGATGACGAGGAGGATTATGAGAATGAAGATGAAGATGCATTTGATGTCCATGCTCATGATGATGCTGGAGAACATGATAATCCTAGCATTGAATTTGATCCAGATGTATTTTCAAGTGATGAAGCCTATGCAAGGGCATTACAAGAGGCTGAAGAGAGGGAAATGGCAGCTAGACTCCTGGCACTTGCTGGGATAAATGACCGCGAGGCTGGGGAAGCAGAGGATCATGGTGCTAATTCTCAGGATGCATGGGAAGATGTTGATCCAGATGAACTTTCATATGAGGAATTACTGGCATTGGGTGAAGTAGTTGGAACTGAGAGCAGAGGTCTTTCAACTGATACTCTTGCCGGTCTGCCATCAATCAAGTTCAAGACTGGGAGCGATCAACATGGAAGCAATGATTCGTGTGTCATCTGTCGGATGGACTATGAGGACGACGAGTCCTTGACAGTTCTTTCCTGCAAACATCTGTACCATCCTGAGTGCATCAATAATTGGTTGAAAATAAACAAGGTTTGCCCTGTTTGCAGTACTGAGGTATCTGCTTCCGGGAGCAGCTAG 1041 0.4832 MENDTAATNTNGSATATAKLAIAGGKSNSHSEEEDRSNFNNGVEEHMAEQVDEEEEEEAEAEEDSDGGEGGEGEQTGSASRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSYLHDDGDDFDDLHDGTDLDEDDEDDDDDDDDEEDYENEDEDAFDVHAHDDAGEHDNPSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDREAGEAEDHGANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTLAGLPSIKFKTGSDQHGSNDSCVICRMDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03846 346 MobiDBLite consensus disorder prediction 140 170 - -
Arst9g03846 346 MobiDBLite consensus disorder prediction 1 17 - -
Arst9g03846 346 SMART ring_2 296 336 IPR001841 -
Arst9g03846 346 MobiDBLite consensus disorder prediction 1 93 - -
Arst9g03846 346 FunFam E3 ubiquitin ligase BIG BROTHER-related 262 343 - -
Arst9g03846 346 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 41 345 IPR043312 -
Arst9g03846 346 Coils Coil 44 64 - -
Arst9g03846 346 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 343 IPR013083 -
Arst9g03846 346 MobiDBLite consensus disorder prediction 119 194 - -
Arst9g03846 346 SUPERFAMILY RING/U-box 287 341 - -
Arst9g03846 346 MobiDBLite consensus disorder prediction 48 70 - -
Arst9g03846 346 ProSiteProfiles Zinc finger RING-type profile. 296 337 IPR001841 -
Arst9g03846 346 Pfam Ring finger domain 294 336 IPR001841 -
Arst9g03846 346 MobiDBLite consensus disorder prediction 171 190 - -
Arst9g03846 346 MobiDBLite consensus disorder prediction 75 93 - -
Arst9g03846 346 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03846 Arst-Chr9 114401970 114405320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03846 84 240 C3H Transcription Factor Family AT3G19910 54.777 1.15e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03846 K19045 - gmx:100787418 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03846 9 114401970 114405320 Arst9g03846 9 114401970 114405320 ECH