Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03804 ATGCAAAACTTAATTGAGAGACTGAGGCCTCTTGTTGGATTGAACGGTTGGGACTACTGTGTATACTGGAAACTAAGTGAAGATCAAAGGTTTGTTGAGTGGTTGGGATGCTGTTGTGGTGGCACTGATCAAAACAATAATGTTGGGGAAGACATTCACATTTTCCCATGTAGGGATACCATGTTCTCACATCCCAGAACTAACCATTGTTATCTTCTTTCTCAGCTTCCTACTTCCATTTCCATCATAGATTCTGGGATTCATGCACAGACCCTATTAACAAACCAACCCAATTGGGTCAACTATTCCCCAAATATCTTGCAAGAAACAATTGGGACCCAGGTTTTGATTCCAGTGCCAGGTGGACTAGTTGAGCTGTTTGTAACCAAACAAGTACCTGAAGATCATCAAGTAATTGATTTTGTGACAGCACAATGCATTGTATTGGTAGAGCAAGAAGCAGCAAACAACTCAACAAGTTTCAACATGCAATCAAATGTTGTTGGAGATGATAATAATAATAATCATAATAATAATAATAATGAAAATCAAGTGATGATGAACAACAACAACAACAGCAATAATCAGTTTGTTCTCACAACTGCACCAGAAACTTCACCACATGATGAAATCCCCATCACTCTATGCAGTTCTCCACTCAACTTCATGCAACAGTTCAGAACAATGAATAAGAACAACGATAACAACAATAACAACAATGCATTTTCTGAAGAATATCAAGGTTCAATATTCCTCCATGAAAACCAAAACAACAATAACCAGCCAATGAAAGCAGCAGCAATGGAGGAAGAAGAAGAAGAAGAGCAGCAAGTGGGGACAAAGGAGAATAACAACAACAACAAAAATGAAGGAGGAGTTGTTGGTGTTGGAAGGTCAGATTCAATGTCAGATTGCAGTGATCAGAACGAAGAAGAGGAAGATGGAAAATACAGAAGGAGGAATGGAAAAGGGAACCAGTCAAAGAACCTTGTTGCTGAAAGAAAGAGAAGGAAGAAACTGAATGACAGGCTGTACAATCTTCGTTCATTGGTTCCAAGAATATCCAAGCTTGATAGAGCTTCCATTCTTGGCGATGCAATTGAGTTTGTTAAGGATTTGCAAAAGCAGGTCAAGGATCTTCAAGATGAACTTGAGGACAATAACAACAATTCTGACACTACTGCTGTTGATCATCATGATAGTAGCAACCAGTTTCTTGATCATTTCGGAGCATCCTATGTTGTCCCAAATCACAAGCATATGCAGCAAGATGCAGTGGATGCCACTACTCTTACCATGGACAAGCAGCACTCCCAACAAATGGAGCCTCAAGTGGAAGTGGCAGTGATAGATGGGAAGGAGTACTTTGTGAAGGTATTCTGTGAACACAGAGCAGGTGGATTTGTGAAATTGATGGAGGCACTCAACACCTTAGGCATGGATGTTGTACATGCCACTGTCACTAGCCACAAAGGCCTTGTCTCTAATGTCTTCAAAGTTGAGAAAAAGGATAGTGATATGGTGGAGGCTGAAGATGTGAGAGACTCATTGCTAGAGCTTACAAGGAACCCATCATGTAGGGTTTGGAGTAATAATAATACAAAGAATAATAATCCCACATCGGAGAATTCCAATGGTGTTGCTGTGGGAAGGGATCATCATCATCATCATCATCATCACATGCCCGCATATCATCCCCATCCATTTCATACTTAA 1716 0.4021 MQNLIERLRPLVGLNGWDYCVYWKLSEDQRFVEWLGCCCGGTDQNNNVGEDIHIFPCRDTMFSHPRTNHCYLLSQLPTSISIIDSGIHAQTLLTNQPNWVNYSPNILQETIGTQVLIPVPGGLVELFVTKQVPEDHQVIDFVTAQCIVLVEQEAANNSTSFNMQSNVVGDDNNNNHNNNNNENQVMMNNNNNSNNQFVLTTAPETSPHDEIPITLCSSPLNFMQQFRTMNKNNDNNNNNNAFSEEYQGSIFLHENQNNNNQPMKAAAMEEEEEEEQQVGTKENNNNNKNEGGVVGVGRSDSMSDCSDQNEEEEDGKYRRRNGKGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKLDRASILGDAIEFVKDLQKQVKDLQDELEDNNNNSDTTAVDHHDSSNQFLDHFGASYVVPNHKHMQQDAVDATTLTMDKQHSQQMEPQVEVAVIDGKEYFVKVFCEHRAGGFVKLMEALNTLGMDVVHATVTSHKGLVSNVFKVEKKDSDMVEAEDVRDSLLELTRNPSCRVWSNNNTKNNNPTSENSNGVAVGRDHHHHHHHHMPAYHPHPFHT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03804 571 MobiDBLite consensus disorder prediction 528 547 - -
Arst9g03804 571 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 143 IPR025610 -
Arst9g03804 571 CDD bHLH_AtAMS_like 327 393 - -
Arst9g03804 571 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 324 373 IPR011598 GO:0046983
Arst9g03804 571 MobiDBLite consensus disorder prediction 170 197 - -
Arst9g03804 571 CDD ACT_UUR-ACR-like 457 520 - -
Arst9g03804 571 Coils Coil 264 284 - -
Arst9g03804 571 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 184 522 - -
Arst9g03804 571 Pfam Helix-loop-helix DNA-binding domain 331 374 IPR011598 GO:0046983
Arst9g03804 571 Coils Coil 363 390 - -
Arst9g03804 571 MobiDBLite consensus disorder prediction 551 571 - -
Arst9g03804 571 SMART finulus 330 379 IPR011598 GO:0046983
Arst9g03804 571 MobiDBLite consensus disorder prediction 264 335 - -
Arst9g03804 571 MobiDBLite consensus disorder prediction 528 571 - -
Arst9g03804 571 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 388 IPR036638 GO:0046983
Arst9g03804 571 Gene3D - 312 390 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03804 Arst-Chr9 114076335 114079385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03804 1 558 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 42.409 5.33e-130 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g03804 bHLH-MYC_N 5e-17 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03804 - - aip:107616200 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03804 9 114076335 114079385 Arst9g03804 9 114076335 114079385 ECH