Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03798 ATGTCATCTCCACCAGGCCCCATTCACTTTTTCCAGATTGTTAATGAAACCAGCCTTCAAAATGGTGAATTGAGGATTCGCAGAAGTTTTGTAAGTGAACATTGGCAAGGAATATCAAGCCCGGTATTACTTGTGCTTCCTAATGGTTCCGAATGGAAGATGGACTGGGAAAAGCGTGATGCTGATGTTTGCTTTGTTCAAGGTTGGAAGAAATTTGCAGAGTTTTATTCTTTGGAAAAGGAGCAGGTTTTGATGTTCAAGTATGAAGGGAAGTCACGGTTCAATGTTATAATACTCGGTCGGAGTGGCTTGGAAAGGGAGTATCCTTTGTTGAATGGAACTCTTGAAGCTGAAGGGAGTGGTAACTCTAAAAGGCCAAACTCTCCGTTGCGAAATTCTCCTAAGAAGAGAAGAACCAACACAGAAGAAGAAGCTAGATTCAATGCATGTTCTCATAATGCAAGGCCAAGAGACAGAGATGGAAGGAGAATCTTCTCAAAATCTGAGGCTTCTAACAACGTGGAGGCACCAAAACATGCTGAAAGTAGTAGTGCTTTGGAGAGAGCCTGGGCCTTCAGTTCTCTGAATCCTTGGTTCTATCGCAGAATGAGACCAGCGTACATCAATAACTATCTTCTGTTCAGAGCAGAAGATTATGTAACAGAAGAAGAAAGAAAGGAGAATGAGTTTCTCAGTCTCTGGGTTACCGATGAGAGTAGACCATGGCATGCTAAGATCTCGAAGCATGATAGTAATGGACAGATAATGCTTACTACGGGTTGGAAGCAATTTGTAAGGGACAACAACCTGAAACTAAATGATGTTTGTGTTTTTGAGAAAACTAGAAATTCCGAAGGACTTTCATTTAGAGTTATTATCTACCGTGCCACGCAAGAATCAACCAATATTCCAGCTCAAGATGGAGCAGACCAAAGCAACCAAACCAATGTTAGAAACAGTTTTGCTGAAAGGGGCCATGAAGGAACTTCAAAAGAATACTCAAAAAGTTTCAGATTACAAACGTCGCGGACGTGCCAGCAAATGGACTGA 1050 0.4171 MSSPPGPIHFFQIVNETSLQNGELRIRRSFVSEHWQGISSPVLLVLPNGSEWKMDWEKRDADVCFVQGWKKFAEFYSLEKEQVLMFKYEGKSRFNVIILGRSGLEREYPLLNGTLEAEGSGNSKRPNSPLRNSPKKRRTNTEEEARFNACSHNARPRDRDGRRIFSKSEASNNVEAPKHAESSSALERAWAFSSLNPWFYRRMRPAYINNYLLFRAEDYVTEEERKENEFLSLWVTDESRPWHAKISKHDSNGQIMLTTGWKQFVRDNNLKLNDVCVFEKTRNSEGLSFRVIIYRATQESTNIPAQDGADQSNQTNVRNSFAERGHEGTSKEYSKSFRLQTSRTCQQMD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03798 349 MobiDBLite consensus disorder prediction 135 162 - -
Arst9g03798 349 SUPERFAMILY DNA-binding pseudobarrel domain 3 103 IPR015300 -
Arst9g03798 349 MobiDBLite consensus disorder prediction 323 349 - -
Arst9g03798 349 Gene3D - 178 299 IPR015300 -
Arst9g03798 349 PANTHER B3 DOMAIN-CONTAINING 7 283 - -
Arst9g03798 349 MobiDBLite consensus disorder prediction 115 162 - -
Arst9g03798 349 MobiDBLite consensus disorder prediction 334 349 - -
Arst9g03798 349 ProSiteProfiles B3 DNA-binding domain profile. 198 297 IPR003340 GO:0003677
Arst9g03798 349 SMART B3_2 10 102 IPR003340 GO:0003677
Arst9g03798 349 SMART B3_2 191 297 IPR003340 GO:0003677
Arst9g03798 349 Pfam B3 DNA binding domain 14 98 IPR003340 GO:0003677
Arst9g03798 349 Pfam B3 DNA binding domain 236 296 IPR003340 GO:0003677
Arst9g03798 349 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
Arst9g03798 349 CDD B3_DNA 235 295 IPR003340 GO:0003677
Arst9g03798 349 SUPERFAMILY DNA-binding pseudobarrel domain 193 296 IPR015300 -
Arst9g03798 349 CDD B3_DNA 9 99 IPR003340 GO:0003677
Arst9g03798 349 Gene3D - 6 103 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03798 Arst-Chr9 114036753 114039478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03798 10 296 B3 DNA Binding Superfamily AT3G18990 24.128 6.21e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst9g03798 B3 3.5e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03798 - - adu:107467278 717.613