Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03796 ATGTCTTGTCATTTTCACCAAGGGAATGGTGTCATGCCTATTCTCTTCTTCAAGATTATACTCAAAACTAATCTTAAAAGTCTTAAAATACCCGACAATTTTGCACTGAAACATGGAAGTGGTTTGTCCAATCCAGTGTTCTTAAAGCCTCCAGATGGAACAAGGTGGAAGGTGTGTTTGAAAAAAAAGAATGATCAAGTTTGGTTTGAAAAGGGTTGGGAAGAATTTACTCAAAATTACTCTCTGGATCACGGATGCTTGGTTCTGTTTAAATATGAAGGAACTACTTCTTCCCAATTTGATGTCATTATCATTGATGACAGTGCTTTAGAAATAGACTATTCTTCGTATGGAAATGATGATGATGATGTTTCAGTTCAGATTGCGAAGGAAATCCATCCATACAAGAAGAACAAAGAAACCATGAGAGGTGAGAAGAATGTGACTACTTCTTTGTCATTGAATTGGCCAAGGGAACCAAGAGCACGAGAAGAAGCTATCAAATTCGTATCTAACAACCCTTTTTTCACGGTGCTCCTAAAGGCTCCTCATATCACACAATACCTACTGTGCATACCAGTTTTGGAAGGTTATGTGGATAATGGAGTGAAGAATGTGAAGCTTGAGTATAGGGATAGATCGTGGCCTGTGAGGATGCTTAGTTGTAACAAAACCTATTCAAATCGCTTCTTTTCTGCTGGATGGAACTTGTTTGCACAAGAGAATGAGTTGAAGCCTGGAGATGTTTGTGTCTTTGAACTTGTTAATATGCAAGATTTGGTCTTTAAGGTTCATGTTTTTGCTGCCCATCATGCTTAA 819 0.381 MSCHFHQGNGVMPILFFKIILKTNLKSLKIPDNFALKHGSGLSNPVFLKPPDGTRWKVCLKKKNDQVWFEKGWEEFTQNYSLDHGCLVLFKYEGTTSSQFDVIIIDDSALEIDYSSYGNDDDDVSVQIAKEIHPYKKNKETMRGEKNVTTSLSLNWPREPRAREEAIKFVSNNPFFTVLLKAPHITQYLLCIPVLEGYVDNGVKNVKLEYRDRSWPVRMLSCNKTYSNRFFSAGWNLFAQENELKPGDVCVFELVNMQDLVFKVHVFAAHHA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03796 272 CDD B3_DNA 175 267 IPR003340 GO:0003677
Arst9g03796 272 Gene3D - 157 271 IPR015300 -
Arst9g03796 272 ProSiteProfiles B3 DNA-binding domain profile. 175 270 IPR003340 GO:0003677
Arst9g03796 272 PANTHER B3 DOMAIN-CONTAINING 15 264 - -
Arst9g03796 272 ProSiteProfiles B3 DNA-binding domain profile. 13 108 IPR003340 GO:0003677
Arst9g03796 272 SMART B3_2 16 108 IPR003340 GO:0003677
Arst9g03796 272 SMART B3_2 176 268 IPR003340 GO:0003677
Arst9g03796 272 Pfam B3 DNA binding domain 24 103 IPR003340 GO:0003677
Arst9g03796 272 Pfam B3 DNA binding domain 175 268 IPR003340 GO:0003677
Arst9g03796 272 CDD B3_DNA 15 106 IPR003340 GO:0003677
Arst9g03796 272 Gene3D - 13 109 IPR015300 -
Arst9g03796 272 SUPERFAMILY DNA-binding pseudobarrel domain 171 268 IPR015300 -
Arst9g03796 272 SUPERFAMILY DNA-binding pseudobarrel domain 15 106 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03796 Arst-Chr9 114023887 114025488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03796 120 267 B3 DNA Binding Superfamily AT3G18990 32.903 9.20e-14 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst9g03796 B3 3.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03796 - - adu:107467238 448.358