Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03795 ATGTCGTCTTCTTCTCAGTGGCGTGGCAAGGCTATAATCCCTGTCCATTTCTCAGCCATTATCTTCAACAAAACTGATCTTCAGACTCTGAAAATATCAAGTAAATTTACAAGGAGATATGGAGGTGGTTTGTCGAATCCATTGTTTTTGAAGCCTCCAGATGGCACCAAATGGGAAGTGAATTGGACTAGAAAAGATGATGAGGAGGTTTGGTTCCAAAAGGGTTGGAACAAATTCACTGAAAACTACTCCTTAGATCATGGCCACTTGATTCTTTTCACCTATCATGGAAATTCACAACTTGATGTTCACATCTTTGACAAATCTGCCTCTGAAATACTCTATCCAGGGTTAAAGTTAAACACTACTACTACTACTACTGCTTGTGATGATGAAAAGAACATCAAACTTGATCTCATGCACAATGATGATGACTCCATTGAGATTTTGAAGCCTTGTAAACACAAACGCAGCATGCTAGTGTTGGTTCCTCAACCTTGTAATAAAAGAATGAAAGATGAGAAGAAGAAGGTTGCTGAAAGAAGATCAAGTTGTTCATCATTGAATTGGCCAAAGCAAGAAAGAGCACAGGAAGTAGCTATGAACTTCGTGTCTGATAATCCTTTCTTCACAATGTTCATAACCCATGTCCATCTAGCACACTACAAAGCGGCTGTGCCAAACTTTGAAGAGTACATTATTGATGAGGAGGAGAAGAATGTGGAGCTGAAAATTGGGGAGAAATCGTGGGAAGTGAAACTGAGGCGTTGTAGCAAGTCGTCAAATTATCGGTACTTTGGTGGTGGCTGGTCCTTGTTTGCACAGGAGAGTGAATTGCTTCCTGGAGATGTTTGTGTCTTTGAACTCATCAACATGCACCCTTTGCAGTTTAGGGTTCATGTTTTCAAAAAGCGGCAGACTTAG 924 0.4048 MSSSSQWRGKAIIPVHFSAIIFNKTDLQTLKISSKFTRRYGGGLSNPLFLKPPDGTKWEVNWTRKDDEEVWFQKGWNKFTENYSLDHGHLILFTYHGNSQLDVHIFDKSASEILYPGLKLNTTTTTTACDDEKNIKLDLMHNDDDSIEILKPCKHKRSMLVLVPQPCNKRMKDEKKKVAERRSSCSSLNWPKQERAQEVAMNFVSDNPFFTMFITHVHLAHYKAAVPNFEEYIIDEEEKNVELKIGEKSWEVKLRRCSKSSNYRYFGGGWSLFAQESELLPGDVCVFELINMHPLQFRVHVFKKRQT 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03795 307 Gene3D - 188 306 IPR015300 -
Arst9g03795 307 SUPERFAMILY DNA-binding pseudobarrel domain 205 304 IPR015300 -
Arst9g03795 307 Pfam B3 DNA binding domain 27 108 IPR003340 GO:0003677
Arst9g03795 307 Pfam B3 DNA binding domain 231 304 IPR003340 GO:0003677
Arst9g03795 307 SUPERFAMILY DNA-binding pseudobarrel domain 21 116 IPR015300 -
Arst9g03795 307 Gene3D - 14 111 IPR015300 -
Arst9g03795 307 ProSiteProfiles B3 DNA-binding domain profile. 248 305 IPR003340 GO:0003677
Arst9g03795 307 SMART B3_2 22 109 IPR003340 GO:0003677
Arst9g03795 307 SMART B3_2 209 305 IPR003340 GO:0003677
Arst9g03795 307 PANTHER B3 DOMAIN-CONTAINING 16 299 - -
Arst9g03795 307 ProSiteProfiles B3 DNA-binding domain profile. 15 109 IPR003340 GO:0003677
Arst9g03795 307 CDD B3_DNA 230 303 IPR003340 GO:0003677
Arst9g03795 307 CDD B3_DNA 30 107 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03795 Arst-Chr9 114019386 114020559 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03795 17 303 B3 DNA Binding Superfamily AT3G18990 28.779 1.63e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst9g03795 B3 1.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03795 - - adu:107467240 638.647