Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03763 ATGGCAACAAACAGGTTTATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCTAAGAGGAAGGTTTATCTCTGCCCTGAGCCCACATGCGTCCACCATGACCCTTCTCGTGCTCTTGGTGACCTCACTGGCATCAAGAAGCACTACTCTCGCAAACATGGCGAGAAGAAGTGGAAGTGCGACAAGTGTTCCAAGAAGTACGCTGTTCAATCCGATTGGAAAGCTCATTCCAAGACCTGTGGCACTAGAGAATACAGATGTGATTGTGGAACTCTCTTCTCCAGGAGAGACAGTTTCATCACCCACAGAGCTTTCTGCGATGCATTGGCTCAAGAAAGTGCAAGGCAGCCACCGAACCTGAACAACGCCATTGGAACCCACCTTTATGGAAGCACCAACAACAACATGGCCCTAGGCTTATCTCAGGTGGGTATGGGTATGGGTGTTGGTGTTGGTGTTGGTGTAGGTGTAGGTGTGGGTGTGGGTCCACAACAGATACCCACCGCCATGCAAGAATCTAGCACTGATCTCTTGCGTCTTAGTGGTCGAACCGGTCAATTAGACCATCACATGCTTCCACCACCACCATCATCCTTTAGAACTTCACACCATCAACCATTCTTCATGAATGATCATCAAAACTTCCATGGCCACCAGGGACTCATGCACCTATCTGATCTTAACAACAATAACAACAACAGCATGGATAATAATTCTCCATCAGGAGGAGGAGGAGGAGCTAATAATAATAGTAGTAACAACAACAATAATAATAATAATAACAGTAACCTCTTCAACCTTCCATTCCTTTCAAGCAACAGCACTAACAGCAGCAACAACTCTTTCTCTGATCAGCATGGTAACAACAACAACAACAATGAAGGGAACAACAGTTTCTTCACCGGTGCAGGTGGAAGTGCTATAATGCACCAAACAACCTCATCAACTGCACCATCACTCTTCAGCAATTCCCTCGAAACAAACAACAACAACAACAACAGCGGTTCCATTTCTCACATGTCCGCAACTGCACTCCTTCAGAAGGCAGCACAGATGGGTGCAACTACAAGCAACAGCACCGCCTCACTCCTCAAGAGCTTCGGCGTCACTTCCACAACCAGCGCAGCTGCAAAACCACCTCATGATCATCATCATCACCTGAGGGCGGCAACAATGGTGAGCAATGCTGCTGCTGCAGCAAGCTATGGAAGCATATTCGGGTCAGGGAGCGAGCAGGGTAACCTCCAGGATCTGATGAACTCGTTTGCCACTGTAGCTTCCGCTGGACACTCTTCTTCCATGTTCGAAAGCGGTGGAGGTTCTTCTGTAGGGCTTATGGCTGGGTTTGATCATGCATACGATCATAGCTCAAACAGTAGGGAGCATAAGCTGCATGGAGTGAGCATTGGTGGTGGCTCCGATGGGCTCACTAGGGACTTTCTCGGTGTTGGTCAAATGGTTAGAACCATGAGCAGTGGCGGCGGCGGCGGTGGAGGAGGAGTTTCTCGAAGAGAACAGCAGCAACAACATTGCTTCACGTTGAGCTCGATGGAAGCTGAAAGGAATAGTAATGCTGCGCCGTCAGGCCAATCTTTCGGTAGTAGTGGCGGTGGAGGAGGGAATTTTCAGTGA 1704 0.4853 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLNNAIGTHLYGSTNNNMALGLSQVGMGMGVGVGVGVGVGVGVGPQQIPTAMQESSTDLLRLSGRTGQLDHHMLPPPPSSFRTSHHQPFFMNDHQNFHGHQGLMHLSDLNNNNNNSMDNNSPSGGGGGANNNSSNNNNNNNNNSNLFNLPFLSSNSTNSSNNSFSDQHGNNNNNNEGNNSFFTGAGGSAIMHQTTSSTAPSLFSNSLETNNNNNNSGSISHMSATALLQKAAQMGATTSNSTASLLKSFGVTSTTSAAAKPPHDHHHHLRAATMVSNAAAAASYGSIFGSGSEQGNLQDLMNSFATVASAGHSSSMFESGGGSSVGLMAGFDHAYDHSSNSREHKLHGVSIGGGSDGLTRDFLGVGQMVRTMSSGGGGGGGGVSRREQQQQHCFTLSSMEAERNSNAAPSGQSFGSSGGGGGNFQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03763 567 MobiDBLite consensus disorder prediction 209 360 - -
Arst9g03763 567 Pfam Zinc-finger double-stranded RNA-binding 6 28 IPR022755 -
Arst9g03763 567 Gene3D Classic Zinc Finger 6 50 - -
Arst9g03763 567 SMART c2h2final6 6 28 IPR013087 -
Arst9g03763 567 SMART c2h2final6 82 102 IPR013087 -
Arst9g03763 567 SMART c2h2final6 47 77 IPR013087 -
Arst9g03763 567 MobiDBLite consensus disorder prediction 247 360 - -
Arst9g03763 567 MobiDBLite consensus disorder prediction 540 567 - -
Arst9g03763 567 Gene3D Classic Zinc Finger 60 139 - -
Arst9g03763 567 FunFam Zinc finger protein MAGPIE 2 29 - -
Arst9g03763 567 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 528 IPR031140 -
Arst9g03763 567 FunFam protein indeterminate-domain 5, chloroplastic-like 60 139 - -
Arst9g03763 567 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Arst9g03763 567 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Arst9g03763 567 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03763 Arst-Chr9 113798353 113803918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03763 300 514 C2H2 Transcription Factor Family AT2G02080 30.493 4.28e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst9g03763 zf-C2H2_jaz 3.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03763 K25870 - gmx:100786121 483.026