Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03698 ATGATTTCGTTGAACCCTATCAGCTTTGCTTTCTTCTTCAAATTTCGTTTCGTCTGCGGTACGAAACTTTGTCTACGAGTTGTGTTCTCCTGGAAGTTTGTTCCTCGCCGTTCATCTGGGTTACTGATTTCCCAAATTCCCGGTAAGATTGAAGATCTCAGATCATCTGTGATGAATTCTGTTGTCGGTTCGACGATTGATCTAGGGTTTGTGAAATTCCTAATCTTGCAAATTGTCATCGTTTTGGTATCTGTTCGATTTTTAATCCGCATGTTATTGTCTAGGGTTCCTGAAATTTCTGTCTCTATGCTATTGAATGGAGATGAGAATGTTGGAATGCCTATCAAGTGTGGAAAAATACAAACTACAGTCAAGAAACCACTGCTTAATAGGTTTAGGGATCATATAGTTGAAGGACAAGTTTATAGAATGGCATATTTTACTGTTGTGTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTCCTTTACCGAACCACTGTTGTAGCTGTTGATGAAGATGTAATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGTTGAACATGACCCAAGATTATGATTTCTTAGTTGATGTCATCGGTCTTTTAACTTCAGTCGGAGAAGAGAAAGAATATGCAAAAGAGGGGAAAATTGTGAAAATGATTGCATTGGAATTAACTTCAAAAGATGTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTGAATCATTTTCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTGGTGATTCAGCTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTGTTCAAAATGTCATGTATGCGACTCAAATGTTATTTAATCCTGATATTCCTGAAGTTGTTGAGTTCAGGCAGAGTATGATTGAGCAAGGTGTGAATGGTACCCATCCACTGTTTATTGCAAATGAGGGTAAAGTTCTCTCATTGGAAGATGATTTCATGCGTTTAACTAGGAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATTTTTGGTACAATCCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCGTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTGACTCCAAGATTTAAAATTAAAATAATAGTTGAAGATCATACTGGTGAGGGTATTTTCCTTCTCTTTGATCGTGAGGCATCTTATTTGCTTAAGAAGTCATGTGCTGACTTGTTTACTGAGGTTCAAAGAGATGCAAGTCTTATATGTGGGGATACTTATCCTCCCATATTTCAAGTGCTCATTGGAAAGAAGTTGCTTCTCAAGGTTGATACCAAAGGTGTCCCACAGGATACATTTTATGGGACTTTCCGAGTTAGGAGAATTTGTGATGATTCAACTATTATTGCGATGTTTGAACTTCCCGATTATGATGCTGATGACGAGTGTACTCCAAAAAAGGTTAGATATACATACAAATATTTTTAG 1566 0.3755 MISLNPISFAFFFKFRFVCGTKLCLRVVFSWKFVPRRSSGLLISQIPGKIEDLRSSVMNSVVGSTIDLGFVKFLILQIVIVLVSVRFLIRMLLSRVPEISVSMLLNGDENVGMPIKCGKIQTTVKKPLLNRFRDHIVEGQVYRMAYFTVVSNHGSYRATSHEFKLVFLYRTTVVAVDEDVIPKTCFNMFPFSELLNMTQDYDFLVDVIGLLTSVGEEKEYAKEGKIVKMIALELTSKDVTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGVQNVMYATQMLFNPDIPEVVEFRQSMIEQGVNGTHPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGTIQGIVEDGGWWYSACVCGKGIYPQNGAYYCDFCLKHITNVTPRFKIKIIVEDHTGEGIFLLFDREASYLLKKSCADLFTEVQRDASLICGDTYPPIFQVLIGKKLLLKVDTKGVPQDTFYGTFRVRRICDDSTIIAMFELPDYDADDECTPKKVRYTYKYF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03698 521 Gene3D - 332 496 IPR012340 -
Arst9g03698 521 Gene3D - 180 317 IPR012340 -
Arst9g03698 521 SUPERFAMILY Nucleic acid-binding proteins 118 178 IPR012340 -
Arst9g03698 521 Gene3D - 97 178 IPR012340 -
Arst9g03698 521 CDD RPA1_DBD_C 343 486 IPR047192 -
Arst9g03698 521 Pfam Domain of unknown function DUF223 118 200 IPR003871 -
Arst9g03698 521 CDD RPA1_DBD_A_like 116 173 - -
Arst9g03698 521 CDD RPA1_DBD_B_like 206 309 - -
Arst9g03698 521 Pfam Replication factor-A C terminal domain 357 443 IPR013955 -
Arst9g03698 521 SUPERFAMILY Nucleic acid-binding proteins 340 491 IPR012340 -
Arst9g03698 521 SUPERFAMILY Nucleic acid-binding proteins 186 308 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03698 Arst-Chr9 113275312 113280996 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03698 118 415 Core DNA Replication Machinery Family AT2G06510 25.000 7.40e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03698 - - ahf:112744598 771.926