Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03680 ATGAAAATAAGTTGCAACGGGTGCCGCATACTCCGCAAAGGTTGCAATGATGATTGCGTAATAAGGCCATGCCTGCAGTGGATAAACTCGCCGGAGTCCCAAGCCAATGCCACACTCTTCCTTGCCAAATTCTACGGTCGCACTGGCTTGCTCAACCTCATCACTGCTGCTCCAAAAAACCTTGCCCCGGCTGTGTTTAGGTCTCTCTTGTATGAGGCTTGTGGGAGAATAGTGAATCCCGCATATGGCTCCATGGGCCTCTTCTGGACGGGACAATGGGCCCGATGCGAGGCTGCTGTCCGTGCTGTCTTGATGGGGTCCAAGCCCAATGATGACGTGGCACCTTTTCATTCCCCAAGCTGGGGGTCTTGTGACATACGCCACGTGCCAAGACTCAATACCGGTCTGGTCGACGTCAGAGACAGAACCGGGAAAATCTTCAAGCCCCAACCGCGAGTGGCTTTGCTGGACTCGGATGTGCTGAGCCAGATTCAGCCCAACCGAGCCACCAAGGAAACCGAGATCAACCTGGAACTCTCTCTTGGCTTCCATTGA 555 0.5405 MKISCNGCRILRKGCNDDCVIRPCLQWINSPESQANATLFLAKFYGRTGLLNLITAAPKNLAPAVFRSLLYEACGRIVNPAYGSMGLFWTGQWARCEAAVRAVLMGSKPNDDVAPFHSPSWGSCDIRHVPRLNTGLVDVRDRTGKIFKPQPRVALLDSDVLSQIQPNRATKETEINLELSLGFH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03680 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 142 - -
Arst9g03680 184 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Arst9g03680 184 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03680 Arst-Chr9 113002444 113003212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03680 1 131 AS2 family AT1G68510 64.964 8.43e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst9g03680 LOB 2.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03680 - - gmx:100779034 228.024