Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03666 ATGAGGGTGAAAAGGAGAGATGCAGAATACCAGATGTCTCATAGACTCCTCCCTGACAGCCATAGGCAGCAAATCAGACAATATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAGGATAACTTGATTTGCAATCTTCCAAAGGATTTGAGAAGGGACATTAAGCGCCATCTTTGCTTGGCTTTGCTGATGAGAGT 203 0.4384 MRVKRRDAEYQMSHRLLPDSHRQQIRQYEQYKWQETRGVDEDNLICNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPNPSSNLPTSTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKRKLEESLREDENRLQDALAKAGGSSPSLGATIYASRFAANALRAIRRNGTRKSRVPERLPPMLLQKPAEPDFTAEERN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03666 300 MobiDBLite consensus disorder prediction 271 300 - -
Arst9g03666 300 Gene3D Helix hairpin bin 1 61 - -
Arst9g03666 300 FunFam Cyclic nucleotide-gated ion channel 1 1 61 - -
Arst9g03666 300 ProSiteProfiles cAMP/cGMP binding motif profile. 70 154 IPR000595 -
Arst9g03666 300 Pfam Cyclic nucleotide-binding domain 90 181 IPR000595 -
Arst9g03666 300 Coils Coil 222 242 - -
Arst9g03666 300 SMART cnmp_10 70 201 IPR000595 -
Arst9g03666 300 CDD CAP_ED 70 201 IPR000595 -
Arst9g03666 300 FunFam Cyclic nucleotide-gated ion channel 1 68 186 - -
Arst9g03666 300 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 294 - -
Arst9g03666 300 ProSiteProfiles IQ motif profile. 206 235 IPR000048 GO:0005515
Arst9g03666 300 Gene3D Jelly Rolls 68 188 IPR014710 -
Arst9g03666 300 SUPERFAMILY cAMP-binding domain-like 3 193 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03666 Arst-Chr9 112813839 112816111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03666 1 298 Ion Channels AT5G53130 85.667 2.45e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03666 K05391 - qsa:O6P43_019902 562.377