Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03665 ATGCAGACATATTTGCAATCAACAACAACAACATTAGAGGAGATGAGGGTGAAAAGGAGAGATGCAGAATACCAGATGTCTCATAGACTCCTCCCTGACAGCCATAGGCAGCAAATCAGACAATATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAGGATAACTTGATTTGCAATCTTCCAAAGGATTTGAGAAGGGACATTAAGCGCCATCTTTGCTTGGCTTTGCTGATGAGAGT 245 0.4245 MQTYLQSTTTTLEEMRVKRRDAEYQMSHRLLPDSHRQQIRQYEQYKWQETRGVDEDNLICNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPNPSSNLPTSTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKRKLEESLREDENRLQDALAKAGGSSPSLGATIYASRFAANALRAIRRNGTRKSRVPERLPPMLLQKPAEPDFTAEERN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03665 314 SMART cnmp_10 84 215 IPR000595 -
Arst9g03665 314 ProSiteProfiles IQ motif profile. 220 249 IPR000048 GO:0005515
Arst9g03665 314 Gene3D Helix hairpin bin 10 75 - -
Arst9g03665 314 FunFam Cyclic nucleotide-gated ion channel 1 82 200 - -
Arst9g03665 314 Pfam Cyclic nucleotide-binding domain 104 195 IPR000595 -
Arst9g03665 314 FunFam Cyclic nucleotide-gated ion channel 1 11 75 - -
Arst9g03665 314 CDD CAP_ED 84 215 IPR000595 -
Arst9g03665 314 MobiDBLite consensus disorder prediction 285 314 - -
Arst9g03665 314 ProSiteProfiles cAMP/cGMP binding motif profile. 84 168 IPR000595 -
Arst9g03665 314 Coils Coil 236 256 - -
Arst9g03665 314 Gene3D Jelly Rolls 82 202 IPR014710 -
Arst9g03665 314 SUPERFAMILY cAMP-binding domain-like 14 207 IPR018490 -
Arst9g03665 314 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03665 Arst-Chr9 112813839 112816111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03665 1 312 Ion Channels AT5G53130 85.987 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03665 K05391 - qsa:O6P43_019902 586.645