Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03644 ATGTACCGTTGTGTTATCATTAGCATCATCCTCTACTGTGTGTTGAGCAGAACCACTTTGTGCAGTTATGTGGATCCACAGTTTGAAGCATGTAAACCCCAAACATGCGGCAACCAATCCATAAGCTACCCTTTCTACATCCAATACAAGCAGGAACCTTTCTGTGGGTACCCTGGTTTTGGCATCTCTTGTGATAGTAATGGCTTCCCAGTTCTCAATCTCTCTTATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTCTCCAATGCTGCCTTTTCATCAACCAACACCACCACAGCTGATTATTGTATTTCCCTTACACGGAACCTCACCCTTCCCTCAACCAAGATCTTCACTCTTGTTCATCAGAATTATAATAAGGACATCTTACTGTTCTTCGGCTGTAACCTGTCATCCCTGCCCACAGAGTCGACAAATTACAGAATTGGGTGTTCTGAAGCGAACAACAAAACGGGTGGTTCGTTTCTGGCATTGTATAAGGACGATGTCAAAACGGTAAGCTCGGTGTCTAAGAGTTGCGGGAGGAGCGGAGAGGTGGTGCAGGCGGGGGTGGAAGAGAGTGAAGGAGGAGGGATACAAGAGGCGCTGAGGAGAGGGTTCATGCTGAATTGGAATGCGAGTGATTGTAAGCCGTGCAGTAGCAGCGGAGGAAGGTGTGGCTTCAATGTAACTATGTATTTTTTCCAGTGTTACTGCACTGATAGAATTCATGCTTCCAGATGTGTTATTCCAGATGGTAGAAGCAAGGCTTCCATGAAGATTGGACTTGCACTCGGACTAGCTGCTGCAGTTATTCTGCTGTTAGTAATGGTCACCTACTACACAAGATGGAAGAAGGAAAACTCAAAACACCACCTGGTTGATGCCTTTTTGGAGAGACATGGACACCTTCAAATCAAGAGGTACAGCTATTCCGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGATGGACGACATGTAGCAGTGAAGATCCTAAGTGAACTGAAAGGTGATGGTGATGATTTCATCAATGAAGTTGCTAGTATGAGCAGAACCTCTCACGTTAACATTATTGCTCTTCTTGGATTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGGTCACTTGAGAAGTTAATCTATGAAGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGCCAGACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAATATTTGCACAAGGGCTGCAATACTAGAATCTTGCATTTTGACATTAAGCCTCATAACATTCTATTAGATGAAAATTTCCTACCCAAAATTTCAGACTTCGGACTTGCAAAAATTTGCACAAGAAAAGAAAGTATAGTATCAATATTTGGTGCTAGAGGAACTGCAGGTTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGTAGTATCACATAAGTCTGATGTTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATCAAGGCTGAAGTTGATGCATCGAATGAGATATATTTTCCTTACTGGATACACAATAGACTTGTATCAAATCAAGAGCTTGGTCTGCAAAATATAAGAAATGAATATGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACCAAGCCTTCAACTCGACCATCAATCAGTAAAGTGGTGGAAATGTTGGAAGGAAGAACTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAAATTCTCCCTGA 1866 0.4164 MYRCVIISIILYCVLSRTTLCSYVDPQFEACKPQTCGNQSISYPFYIQYKQEPFCGYPGFGISCDSNGFPVLNLSYTPYIIHQIFYHNQSLRVSNAAFSSTNTTTADYCISLTRNLTLPSTKIFTLVHQNYNKDILLFFGCNLSSLPTESTNYRIGCSEANNKTGGSFLALYKDDVKTVSSVSKSCGRSGEVVQAGVEESEGGGIQEALRRGFMLNWNASDCKPCSSSGGRCGFNVTMYFFQCYCTDRIHASRCVIPDGRSKASMKIGLALGLAAAVILLLVMVTYYTRWKKENSKHHLVDAFLERHGHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGDDFINEVASMSRTSHVNIIALLGFCFQGSKRALVYEFMPNGSLEKLIYEENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFLPKISDFGLAKICTRKESIVSIFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGRRKNIKAEVDASNEIYFPYWIHNRLVSNQELGLQNIRNEYDNEMVRKMTIVSLWCIQTKPSTRPSISKVVEMLEGRTELLQLPPKPYWFSPSNSP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03644 621 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Arst9g03644 621 ProSiteProfiles Protein kinase domain profile. 325 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03644 621 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Arst9g03644 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Arst9g03644 621 SMART serkin_6 325 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03644 621 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
Arst9g03644 621 Gene3D Phosphorylase Kinase; domain 1 302 399 - -
Arst9g03644 621 FunFam PR5-like receptor kinase 400 611 - -
Arst9g03644 621 Pfam Wall-associated receptor kinase C-terminal 175 247 IPR032872 -
Arst9g03644 621 Gene3D Transferase(Phosphotransferase) domain 1 400 611 - -
Arst9g03644 621 Pfam Protein kinase domain 328 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03644 621 FunFam serine/threonine-protein kinase PBS1-like 292 399 - -
Arst9g03644 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 299 616 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03644 Arst-Chr9 112677731 112680746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03644 6 612 Receptor kinase-like Gene Family AT5G38260 40.735 1.50e-148 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst9g03644 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03644 - - ahf:112712060 1231.47