Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03643 ATGTACCGTTGTGTTATCATTAGCATCATCCTCTACTGTGTGTTGAGCAGAACCACTTTGTGCAGTTATGTGGATCCACAGTTTGAAGCATGTAAACCCCAAACATGCGGCAACCAATCCATAAGCTACCCTTTCTACATCCAATACAAGCAGGAACCTTTCTGTGGGTACCCTGGTTTTGGCATCTCTTGTGATAGTAATGGCTTCCCAGTTCTCAATCTCTCTTATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTCTCCAATGCTGCCTTTTCATCAACCAACACCACCACAGCTGATTATTGTATTTCCCTTACACGGAACCTCACCCTTCCCTCAACCAAGATCTTCACTCTTGTTCATCAGAATTATAATAAGGACATCTTACTGTTCTTCGGCTGTAACCTGTCATCCCTGCCCACAGAGTCGACAAATTACAGAATTGGGTGTTCTGAAGCGAACAACAAAACGGGTGGTTCGTTTCTGGCATTGTATAAGGACGATGTCAAAACGGTAAGCTCGGTGTCTAAGAGTTGCGGGAGGAGCGGAGAGGTGGTGCAGGCGGGGGTGGAAGAGAGTGAAGGAGGAGGGATACAAGAGGCGCTGAGGAGAGGGTTCATGCTGAATTGGAATGCGAGTGATTGTAAGCCGTGCAGTAGCAGCGGAGGAAGGTGTGGCTTCAATGTAACTATGTATTTTTTCCAGTGTTACTGCACTGATAGAATTCATGCTTCCAGATGTGTTATTCCAGATGGTAGAAGCAAGGCTTCCATGAAGATTGGACTTGCACTCGGACTAGTTATTCTGCTGTTAGTAATGGTCACCTACTACACAAGATGGAAGAAGGAAAACTCAAAACACCACCTGGTTGATGCCTTTTTGGAGAGACATGGACACCTTCAAATCAAGAGGTACAGCTATTCCGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGATGGACGACATGTAGCAGTGAAGATCCTAAGTGAACTGAAAGGTGATGGTGATGATTTCATCAATGAAGTTGCTAGTATGAGCAGAACCTCTCACGTTAACATTATTGCTCTTCTTGGATTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGGTCACTTGAGAAGTTAATCTATGAAGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGCCAGACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAATATTTGCACAAGGGCTGCAATACTAGAATCTTGCATTTTGACATTAAGCCTCATAACATTCTATTAGATGAAAATTTCCTACCCAAAATTTCAGACTTCGGACTTGCAAAAATTTGCACAAGAAAAGAAAGTATAGTATCAATATTTGGTGCTAGAGGAACTGCAGGTTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGTAGTATCACATAAGTCTGATGTTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATCAAGGCTGAAGTTGATGCATCGAATGAGATATATTTTCCTTACTGGATACACAATAGACTTGTATCAAATCAAGAGCTTGGTCTGCAAAATATAAGAAATGAATATGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACCAAGCCTTCAACTCGACCATCAATCAGTAAAGTGGTGGAAATGTTGGAAGGAAGAACTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAAATTCTCCCTGA 1857 0.4152 MYRCVIISIILYCVLSRTTLCSYVDPQFEACKPQTCGNQSISYPFYIQYKQEPFCGYPGFGISCDSNGFPVLNLSYTPYIIHQIFYHNQSLRVSNAAFSSTNTTTADYCISLTRNLTLPSTKIFTLVHQNYNKDILLFFGCNLSSLPTESTNYRIGCSEANNKTGGSFLALYKDDVKTVSSVSKSCGRSGEVVQAGVEESEGGGIQEALRRGFMLNWNASDCKPCSSSGGRCGFNVTMYFFQCYCTDRIHASRCVIPDGRSKASMKIGLALGLVILLLVMVTYYTRWKKENSKHHLVDAFLERHGHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGDDFINEVASMSRTSHVNIIALLGFCFQGSKRALVYEFMPNGSLEKLIYEENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFLPKISDFGLAKICTRKESIVSIFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGRRKNIKAEVDASNEIYFPYWIHNRLVSNQELGLQNIRNEYDNEMVRKMTIVSLWCIQTKPSTRPSISKVVEMLEGRTELLQLPPKPYWFSPSNSP 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03643 618 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Arst9g03643 618 Gene3D Transferase(Phosphotransferase) domain 1 397 608 - -
Arst9g03643 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Arst9g03643 618 SUPERFAMILY Protein kinase-like (PK-like) 305 597 IPR011009 -
Arst9g03643 618 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Arst9g03643 618 FunFam serine/threonine-protein kinase PBS1-like 289 396 - -
Arst9g03643 618 SMART serkin_6 322 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03643 618 Pfam Wall-associated receptor kinase C-terminal 175 247 IPR032872 -
Arst9g03643 618 PANTHER RUST RESISTANCE KINASE LR10-RELATED 296 613 IPR045874 GO:0004672
Arst9g03643 618 ProSiteProfiles Protein kinase domain profile. 322 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03643 618 FunFam PR5-like receptor kinase 397 608 - -
Arst9g03643 618 Pfam Protein kinase domain 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03643 618 Gene3D Phosphorylase Kinase; domain 1 299 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03643 Arst-Chr9 112677731 112680746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03643 6 609 Receptor kinase-like Gene Family AT5G38260 40.735 2.57e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst9g03643 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03643 - - ahf:112712060 1233.78