Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03642 ATGAATCATGTTCTAATCTCCGTTACGAATATCTATGGCACTTTAAACGTGAGCGGGCCCTCCGACGTGAGTATTCAACTACTCATCCAACAGCGCGTGTTCATAAAATGGAGAAATGCTTGGGAAGCATCAGATGCTATGAGCAGAAGTGGATCAGGATCACCTCCTTTACATGAGCCTTGCTTGCATGTCCTCACAATTACACAACTCTTAATCATGTACCGTTGTGTTATCGTTAGCATCATCCTCTATTCTGTGTTGAGCAGAACCACTTTGAGCAGTTATGTGGATCCACACTACCTGGCATGTGAACCCCAAACATGCGGCAACCAATCCATAACATACCCCTTCTACATCCAAGGCAAACAGCAACCTTTCTGTGGCTACCCTGGTTTTGCCATCTCTTGTGATAGTAATGGCTTTCTGATTCTCAGTCTCTCTAATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTTTCCAATGCTGCCTTTTCATCAGCCAACAGCACTAACACGCCAGATTCTTGTATTTCTGCTGCACACAACCTCACCCTTCCTCCAACCAGTACCTTCAATCTTGTTCATCAGAATAATCATAAGGACATCATGTTCTTCTTCGGCTGTAACCTGTCATCCATGCCCCTAGAGTTGTTAGATTACAGAATTGGGTGTTCTGAAGCGACCAACAAAACTGATGGTTCGGTTCTGGCATTATATAAGGACGATGTAAAAACAGTAAGCTTGGTGTCCAAGAGTTGTGGGACTGGCGGCGAGGTGGTGGACGCGGTGGTGGAAGAGAGTGAAGGAGTTGGGATGGAAGAGGAGCTGAGGAGAGGGTTCATGCTGAATTGGACAGCGAGTGATTGCAAGTTGTGCAATAGCACAGGAGGAAGGTGTGGCTTCAATTCAACTATCTTCACTTTCCAGTGTTACTGCACTGATCGAATTCATGCTTCCAAATGTGTTATTATTACAGATGGTAGAAGCAAGGCTTCCATGAAGATGGGACTTGCACTCGGACTAGCTGCTGCGGTTACTCTGCTGTTAGTAATGGTCACCCTCTACTACACAAGACGGAAGAAGCAAAACCCGAAACACCTTCTGGTTGATGCCTTTCTGGAGAGGCATGGATACCTTCAAATCAAGAGGTACAGCTATTCCGACATGAAGAAAATGACCAACTCCTTCAAAAACAAACTAGGTGCAGGGGGATTTGGCAGTGTATACAAAGGACAATTAAAGGATGGACGACATGTTGCAGTGAAGATCCTAAGTGAATTGAAAGGTGATGGTGAAGATTTCATCAATGAAGTTGTGAGCATGAGCAGAACTTCTCATGTTAACATTGTTGCTCTTCTTGGCTTCTGCTTTGAAGGTTCTAAACAAGCTTTGGTTTATGACTTTATGCCTAATGGGTCCCTTGAGAAGCTACTCTCTGATGAACATGACGTGATAGGGGATCGCCAATTAGATTATCAAACTTTATATGATATTGCAATTGGTGTTGCTAAAGGACTAGAGTATCTGCATAAGGGCTGCAATACTAGAATTCTGCATTTTGATATAAAGCCTCATAACATTCTCTTGGATGAGAATTTCTGTCCCAAAATTTCAGACTTTGGACTTGCCAAAGTTTGTACAAGAAAAGAAAGCATGGTATCGATATCTGGTACAAGAGGAACTGCAGGTTATATTGCCCCAGAGGTATTTTCTAGGAATTTTGGTGTAATATCACATAAGTCGGATGTTTATAGTTATGGAATGATGGTTTTAGAGATGGTTGGGAGAAGGAGGAATATCAAGACTGAAGTAGATGCTTCAAGTGAAACGTATTTTCCTTATTGGATATACAATAGACTTGTGTCAAATCAAGAGCTTGGTCTGCGGAGTATAAGCAATGAATTTGATAATGAGAAGGTAAGAAAGCTGATAATAGTGAGCTTATGGTGCATTCAAACTAACCCTTCAAATCGGCCATCAATAAGTAAGGTGGTGGAAATGCTAGAAGGAAGAATTGAATTGTTGCAATTGCCGCCTAAACCATTTTGGTTTTCCCCCTCGGCCTCTCCCTAA 2091 0.4237 MNHVLISVTNIYGTLNVSGPSDVSIQLLIQQRVFIKWRNAWEASDAMSRSGSGSPPLHEPCLHVLTITQLLIMYRCVIVSIILYSVLSRTTLSSYVDPHYLACEPQTCGNQSITYPFYIQGKQQPFCGYPGFAISCDSNGFLILSLSNTPYIIHQIFYHNQSLRVSNAAFSSANSTNTPDSCISAAHNLTLPPTSTFNLVHQNNHKDIMFFFGCNLSSMPLELLDYRIGCSEATNKTDGSVLALYKDDVKTVSLVSKSCGTGGEVVDAVVEESEGVGMEEELRRGFMLNWTASDCKLCNSTGGRCGFNSTIFTFQCYCTDRIHASKCVIITDGRSKASMKMGLALGLAAAVTLLLVMVTLYYTRRKKQNPKHLLVDAFLERHGYLQIKRYSYSDMKKMTNSFKNKLGAGGFGSVYKGQLKDGRHVAVKILSELKGDGEDFINEVVSMSRTSHVNIVALLGFCFEGSKQALVYDFMPNGSLEKLLSDEHDVIGDRQLDYQTLYDIAIGVAKGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESMVSISGTRGTAGYIAPEVFSRNFGVISHKSDVYSYGMMVLEMVGRRRNIKTEVDASSETYFPYWIYNRLVSNQELGLRSISNEFDNEKVRKLIIVSLWCIQTNPSNRPSISKVVEMLEGRIELLQLPPKPFWFSPSASP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03642 696 SMART serkin_6 400 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03642 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Arst9g03642 696 SUPERFAMILY Protein kinase-like (PK-like) 384 675 IPR011009 -
Arst9g03642 696 Pfam Wall-associated receptor kinase galacturonan-binding 103 166 IPR025287 GO:0030247
Arst9g03642 696 Pfam Protein kinase domain 403 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03642 696 PANTHER RUST RESISTANCE KINASE LR10-RELATED 377 691 IPR045874 GO:0004672
Arst9g03642 696 Pfam Wall-associated receptor kinase C-terminal 255 320 IPR032872 -
Arst9g03642 696 Gene3D Transferase(Phosphotransferase) domain 1 475 686 - -
Arst9g03642 696 ProSiteProfiles Protein kinase domain profile. 400 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03642 696 FunFam PR5-like receptor kinase 475 685 - -
Arst9g03642 696 FunFam serine/threonine-protein kinase PBS1-like 376 474 - -
Arst9g03642 696 Gene3D Phosphorylase Kinase; domain 1 378 474 - -
Arst9g03642 696 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03642 Arst-Chr9 112671601 112674207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03642 96 687 Receptor kinase-like Gene Family AT5G38260 39.703 4.11e-140 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst9g03642 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03642 - - ahf:112712060 1365.13