Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03641 ATGATTTCATTGGTAATTTCGTATCATAGAGTTTGGAGGCATGAAGCATGTTCAATCTCCGTTACGACTATCTGTGGCACTTTAAACGTGAGCGGGCCCTCTGATGTGAGTATTCAACTACTCATCCAACAGCGTGCGTTCATAAAATGGAGAAATGCTTGGGAAGCATCAGATGCTATGAGCAGAAGTGGATCAGGATCACCTCCTTTACATGAGCCTTGCTTGCATGTCCTCACAATTACACAACTCTTAATCATGTACCGTTGTGTTATCGTTAGCATCATCCTCTATTCTGTGTTGAGCAGAACCACTTTGAGCAGTTATGTGGATCCACACTACCTGGCATGTGAACCCCAAACATGCGGCAACCAATCCATAACATACCCCTTCTACATCCAAGGCAAACAGCAACCTTTCTGTGGCTACCCTGGTTTTGCCATCTCTTGTGATAGTAATGGCTTTCTGATTCTCAGTCTCTCTAATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTTTCCAATGCTGCCTTTTCATCAGCCAACAGCACTAACACGCCAGATTCTTGTATTTCTGCTGCACACAACCTCACCCTTCCTCCAACCAGTACCTTCAATCTTGTTCATCAGAATAATCATAAGGACATCATGTTCTTCTTCGGCTGTAACCTGTCATCCATGCCCCTAGAGTTGTTAGATTACAGAATTGGGTGTTCTGAAGCGACCAACAAAACTGATGGTTCGGTTCTGGCATTATATAAGGACGATGTAAAAACAGTAAGCTTGGTGTCCAAGAGTTGTGGGACTGGCGGCGAGGTGGTGGACGCGGTGGTGGAAGAGAGTGAAGGAGTTGGGATGGAAGAGGAGCTGAGGAGAGGGTTCATGCTGAATTGGACAGCGAGTGATTGCAAGTTGTGCAATAGCACAGGAGGAAGGTGTGGCTTCAATTCAACTATCTTCACTTTCCAGTGTTACTGCACTGATCGAATTCATGCTTCCAAATGTGTTATTATTACAGATGGTAGAAGCAAGGCTTCCATGAAGATGGGACTTGCACTCGGACTAGCTGCTGCGGTTACTCTGCTGTTAGTAATGGTCACCCTCTACTACACAAGACGGAAGAAGCAAAACCCGAAACACCTTCTGGTTGATGCCTTTCTGGAGAGGCATGGATACCTTCAAATCAAGAGGTACAGCTATTCCGACATGAAGAAAATGACCAACTCCTTCAAAAACAAACTAGGTGCAGGGGGATTTGGCAGTGTATACAAAGGACAATTAAAGGATGGACGACATGTTGCAGTGAAGATCCTAAGTGAATTGAAAGGTGATGGTGAAGATTTCATCAATGAAGTTGTGAGCATGAGCAGAACTTCTCATGTTAACATTGTTGCTCTTCTTGGCTTCTGCTTTGAAGGTTCTAAACAAGCTTTGGTTTATGACTTTATGCCTAATGGGTCCCTTGAGAAGCTACTCTCTGATGAACATGACGTGATAGGGGATCGCCAATTAGATTATCAAACTTTATATGATATTGCAATTGGTGTTGCTAAAGGACTAGAGTATCTGCATAAGGGCTGCAATACTAGAATTCTGCATTTTGATATAAAGCCTCATAACATTCTCTTGGATGAGAATTTCTGTCCCAAAATTTCAGACTTTGGACTTGCCAAAGTTTGTACAAGAAAAGAAAGCATGGTATCGATATCTGGTACAAGAGGAACTGCAGGTTATATTGCCCCAGAGGTATTTTCTAGGAATTTTGGTGTAATATCACATAAGTCGGATGTTTATAGTTATGGAATGATGGTTTTAGAGATGGTTGGGAGAAGGAGGAATATCAAGACTGAAGTAGATGCTTCAAGTGAAACGTATTTTCCTTATTGGATATACAATAGACTTGTGTCAAATCAAGAGCTTGGTCTGCGGAGTATAAGCAATGAATTTGATAATGAGAAGGTAAGAAAGCTGATAATAGTGAGCTTATGGTGCATTCAAACTAACCCTTCAAATCGGCCATCAATAAGTAAGGTGGTGGAAATGCTAGAAGGAAGAATTGAATTGTTGCAATTGCCGCCTAAACCATTTTGGTTTTCCCCCTCGGCCTCTCCCTAA 2130 0.423 MISLVISYHRVWRHEACSISVTTICGTLNVSGPSDVSIQLLIQQRAFIKWRNAWEASDAMSRSGSGSPPLHEPCLHVLTITQLLIMYRCVIVSIILYSVLSRTTLSSYVDPHYLACEPQTCGNQSITYPFYIQGKQQPFCGYPGFAISCDSNGFLILSLSNTPYIIHQIFYHNQSLRVSNAAFSSANSTNTPDSCISAAHNLTLPPTSTFNLVHQNNHKDIMFFFGCNLSSMPLELLDYRIGCSEATNKTDGSVLALYKDDVKTVSLVSKSCGTGGEVVDAVVEESEGVGMEEELRRGFMLNWTASDCKLCNSTGGRCGFNSTIFTFQCYCTDRIHASKCVIITDGRSKASMKMGLALGLAAAVTLLLVMVTLYYTRRKKQNPKHLLVDAFLERHGYLQIKRYSYSDMKKMTNSFKNKLGAGGFGSVYKGQLKDGRHVAVKILSELKGDGEDFINEVVSMSRTSHVNIVALLGFCFEGSKQALVYDFMPNGSLEKLLSDEHDVIGDRQLDYQTLYDIAIGVAKGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESMVSISGTRGTAGYIAPEVFSRNFGVISHKSDVYSYGMMVLEMVGRRRNIKTEVDASSETYFPYWIYNRLVSNQELGLRSISNEFDNEKVRKLIIVSLWCIQTNPSNRPSISKVVEMLEGRIELLQLPPKPFWFSPSASP 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03641 709 SMART serkin_6 413 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03641 709 FunFam serine/threonine-protein kinase PBS1-like 389 487 - -
Arst9g03641 709 FunFam PR5-like receptor kinase 488 698 - -
Arst9g03641 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Arst9g03641 709 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Arst9g03641 709 Pfam Wall-associated receptor kinase galacturonan-binding 116 179 IPR025287 GO:0030247
Arst9g03641 709 PANTHER RUST RESISTANCE KINASE LR10-RELATED 390 704 IPR045874 GO:0004672
Arst9g03641 709 ProSiteProfiles Protein kinase domain profile. 413 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03641 709 Pfam Protein kinase domain 416 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03641 709 Gene3D Transferase(Phosphotransferase) domain 1 488 699 - -
Arst9g03641 709 Gene3D Phosphorylase Kinase; domain 1 391 487 - -
Arst9g03641 709 SUPERFAMILY Protein kinase-like (PK-like) 397 688 IPR011009 -
Arst9g03641 709 Pfam Wall-associated receptor kinase C-terminal 268 333 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03641 Arst-Chr9 112671600 112680746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03641 109 700 Receptor kinase-like Gene Family AT5G38260 39.703 4.90e-140 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst9g03641 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03641 - - ahf:112712060 1347.41