Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03640 ATGTACCGTTGTGTTATCATTAGCATCATCCTCTACTGTGTGTTGAGCAGAACCACTTTGTGCAGTTATGTGGATCCACAGTTTGAAGCATGTAAACCCCAAACATGCGGCAACCAATCCATAAGCTACCCTTTCTACATCCAATACAAGCAGGAACCTTTCTGTGGGTACCCTGGTTTTGGCATCTCTTGTGATAGTAATGGCTTCCCAGTTCTCAATCTCTCTTATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTCTCCAATGCTGCCTTTTCATCAACCAACACCACCACAGCTGATTATTGTATTTCCCTTACACGGAACCTCACCCTTCCCTCAACCAAGATCTTCACTCTTGTTCATCAGAATTATAATAAGGACATCTTACTGTTCTTCGGCTGTAACCTGTCATCCCTGCCCACAGAGTCGACAAATTACAGAATTGGGTGTTCTGAAGCGAACAACAAAACGGGTGGTTCGTTTCTGGCATTGTATAAGGACGATGTCAAAACGGTAAGCTCGGTGTCTAAGAGTTGCGGGAGGAGCGGAGAGGTGGTGCAGGCGGGGGTGGAAGAGAGTGAAGGAGGAGGGATACAAGAGGCGCTGAGGAGAGGGTTCATGCTGAATTGGAATGCGAGTGATTGTAAGCCGTGCAGTAGCAGCGGAGGAAGGTGTGGCTTCAATGTAACTATGTATTTTTTCCAGTGTTACTGCACTGATAGAATTCATGCTTCCAGATGTGTTATTCCAGATGGTAGAAGCAAGGCTTCCATGAAGATTGGACTTGCACTCGGACTAGATGGTAGAAGCAAGGCTTCCATGAAGATGGGACTTGCACTCGGACTAGCTGCTGCGGTTACTCTGCTGTTAGTAATGGTCACCCTCTACTACACAAGACGGAAGAAGCAAAACCCGAAACACCTTCTGGTTGATGCCTTTCTGGAGAGGCATGGATACCTTCAAATCAAGAGGTACAGCTATTCCGACATGAAGAAAATGACCAACTCCTTCAAAAACAAACTAGGTGCAGGGGGATTTGGCAGTGTATACAAAGGACAATTAAAGGATGGACGACATGTTGCAGTGAAGATCCTAAGTGAATTGAAAGGTGATGGTGAAGATTTCATCAATGAAGTTGTGAGCATGAGCAGAACTTCTCATGTTAACATTGTTGCTCTTCTTGGCTTCTGCTTTGAAGGTTCTAAACAAGCTTTGGTTTATGACTTTATGCCTAATGGGTCCCTTGAGAAGCTACTCTCTGATGAACATGACGTGATAGGGGATCGCCAATTAGATTATCAAACTTTATATGATATTGCAATTGGTGTTGCTAAAGGACTAGAGTATCTGCATAAGGGCTGCAATACTAGAATTCTGCATTTTGATATAAAGCCTCATAACATTCTCTTGGATGAGAATTTCTGTCCCAAAATTTCAGACTTTGGACTTGCCAAAGTTTGTACAAGAAAAGAAAGCATGGTATCGATATCTGGTACAAGAGGAACTGCAGGTTATATTGCCCCAGAGGTATTTTCTAGGAATTTTGGTGTAATATCACATAAGTCGGATGTTTATAGTTATGGAATGATGGTTTTAGAGATGGTTGGGAGAAGGAGGAATATCAAGACTGAAGTAGATGCTTCAAGTGAAACGTATTTTCCTTATTGGATATACAATAGACTTGTGTCAAATCAAGAGCTTGGTCTGCGGAGTATAAGCAATGAATTTGATAATGAGAAGGTAAGAAAGCTGATAATAGTGAGCTTATGGTGCATTCAAACTAACCCTTCAAATCGGCCATCAATAAGTAAGGTGGTGGAAATGCTAGAAGGAAGAATTGAATTGTTGCAATTGCCGCCTAAACCATTTTGGTTTTCCCCCTCGGCCTCTCCCTAA 1917 0.4257 MYRCVIISIILYCVLSRTTLCSYVDPQFEACKPQTCGNQSISYPFYIQYKQEPFCGYPGFGISCDSNGFPVLNLSYTPYIIHQIFYHNQSLRVSNAAFSSTNTTTADYCISLTRNLTLPSTKIFTLVHQNYNKDILLFFGCNLSSLPTESTNYRIGCSEANNKTGGSFLALYKDDVKTVSSVSKSCGRSGEVVQAGVEESEGGGIQEALRRGFMLNWNASDCKPCSSSGGRCGFNVTMYFFQCYCTDRIHASRCVIPDGRSKASMKIGLALGLDGRSKASMKMGLALGLAAAVTLLLVMVTLYYTRRKKQNPKHLLVDAFLERHGYLQIKRYSYSDMKKMTNSFKNKLGAGGFGSVYKGQLKDGRHVAVKILSELKGDGEDFINEVVSMSRTSHVNIVALLGFCFEGSKQALVYDFMPNGSLEKLLSDEHDVIGDRQLDYQTLYDIAIGVAKGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESMVSISGTRGTAGYIAPEVFSRNFGVISHKSDVYSYGMMVLEMVGRRRNIKTEVDASSETYFPYWIYNRLVSNQELGLRSISNEFDNEKVRKLIIVSLWCIQTNPSNRPSISKVVEMLEGRIELLQLPPKPFWFSPSASP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03640 638 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Arst9g03640 638 Pfam Wall-associated receptor kinase C-terminal 175 247 IPR032872 -
Arst9g03640 638 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Arst9g03640 638 Pfam Protein kinase domain 345 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03640 638 PANTHER RUST RESISTANCE KINASE LR10-RELATED 320 633 IPR045874 GO:0004672
Arst9g03640 638 Gene3D Phosphorylase Kinase; domain 1 320 416 - -
Arst9g03640 638 SMART serkin_6 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03640 638 FunFam serine/threonine-protein kinase PBS1-like 318 416 - -
Arst9g03640 638 Gene3D Transferase(Phosphotransferase) domain 1 417 628 - -
Arst9g03640 638 FunFam PR5-like receptor kinase 417 627 - -
Arst9g03640 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Arst9g03640 638 ProSiteProfiles Protein kinase domain profile. 342 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03640 638 SUPERFAMILY Protein kinase-like (PK-like) 326 617 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03640 Arst-Chr9 112671598 112680746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03640 6 629 Receptor kinase-like Gene Family AT5G38260 39.408 2.59e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst9g03640 Pkinase 8.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03640 - - ahf:112712060 1140.95